Brassica oleracea (wild cabbage): 106329233
Help
Entry
106329233 CDS
T04124
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106329233
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106329233
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
106329233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-Nse
zf-RING_16
zf-C3HC4_3
Prok-RING_1
TctB
RINGv
zinc_ribbon_16
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
106329233
NCBI-ProteinID:
XP_013623312
LinkDB
All DBs
Position
C3:22613869..22615243
Genome browser
AA seq
387 aa
AA seq
DB search
MRRSDHATPAFPGVLPIVFLLILSVAELVAGQGQPDPRDERYNYGNLSPAMAVIVVILIA
VLFFMGFFSIYFRHCSGAPDAGVSPAGGGRTRGNVTAAARGLDVSVVETFPTFVYSEVKT
QKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLEAHVTCPVCRTNLAEQVA
VEPDLELRDVVVDPEPVVASPVPEQSVTNEVDSRRLPGVPVDVKRVKFSRSHTTGHSVVQ
PGECTERFTLRLPEEVRKRMVENWKLNRSDSLTRGGSSRRGKPIDRSRAWSDRWLFRKTP
SFLWRSRDDGSIRLGATGSVRGNAVVNSTGDSVRSDRWALLRNGSFLWRNSSVHVRRGGG
VNKDGEGTSVKSTGTGGSTNGSMRLPV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgagaagatctgatcacgcgacgccggcgtttcccggcgttttgccgattgttttcttg
ctaatattatcagtggcggagcttgtggcgggtcagggccagcctgatccgagagatgaa
aggtataactacggtaacttaagtccagccatggcggtgatcgtcgtgatcctcatcgca
gttctcttcttcatgggcttcttctccatctacttccgccactgctccggcgcacccgac
gccggagtttcgccggctggtggtggaagaaccagaggaaacgtcaccgcggcggcgcgt
gggctagacgtttccgtggtggagacgtttcctacgtttgtctactcggaggtgaagacg
cagaagctcgggaaaggggagctggagtgtgcgatctgtctgaacgagttcgaagacgac
gaaacgctgcgtttgctgcctaaatgcgatcacgtgtttcaccctcactgcatcggcgcc
tggcttgaggctcacgtgacttgccccgtttgcagaacgaatctcgccgagcaagtagct
gtcgaaccggatcttgagttgcgggatgtggtggtggatcctgaaccggtggttgcttct
cctgtaccggaacaatcggttacgaatgaagtcgattcgaggagattacctggtgtaccg
gtggatgttaaacgagtcaagttttcgagatcgcatacgacggggcactcggtggttcaa
ccgggagagtgtaccgagcggtttactctccggttacctgaagaggtgaggaagaggatg
gtggaaaattggaaactgaaccggtcggatagtcttactaggggagggagttcgagaaga
ggtaaaccgattgaccggtcaagggcttggtctgatcgttggttgttccgcaaaacgccg
tcgtttctgtggaggagtcgtgatgatggttcgattaggctaggtgctaccggtagcgtt
agaggcaatgctgtggtgaattcaaccggtgattcggtacggtcagaccggtgggcttta
cttagaaacgggtcgtttctgtggaggaacagttcggtgcatgtgcgaagaggaggagga
gtcaataaggacggcgaaggaacttcggttaagtcaaccgggacaggcggctcaaccaat
ggttcgatgaggttaccggtttag
DBGET
integrated database retrieval system
