Brassica oleracea (wild cabbage): 106329307
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Entry
106329307 CDS
T04124
Name
(RefSeq) long chain acyl-CoA synthetase 1 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00061
Fatty acid biosynthesis
boe00071
Fatty acid degradation
boe01100
Metabolic pathways
boe01212
Fatty acid metabolism
boe04146
Peroxisome
Module
boe_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
106329307
00071 Fatty acid degradation
106329307
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106329307
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
boe01004
]
106329307
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106329307
Enzymes [BR:
boe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
106329307
Lipid biosynthesis proteins [BR:
boe01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
106329307
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of breast milk
106329307
Exosomal proteins of breast cancer cells
106329307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Ntox4
Motif
Other DBs
NCBI-GeneID:
106329307
NCBI-ProteinID:
XP_013623399
LinkDB
All DBs
Position
C3:15882584..15887106
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AA seq
672 aa
AA seq
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MKFFAAKLEEGVKGGNGKPSVGPVYRNLLSEKGFPPMDSDITTAWDVFRSLLGFVSKSVE
KFPYNKMLGWRRIVDEKVGPYMWKTYKEAYGEVLQIGSAIRALGAEPGCRVGIYGVNCPQ
WIIAMEACAAHTLICVPLYDTLGSGAVDYIVDHAEIDFVFVQDNKIKGLLEPNCKCAKRL
KAIVSFVNVSEEDSLKASEIGVKTFSWLDFLRMGREKPEETNPPKPSNICTIMYTSGTSG
NPKGVVLTHEAVATYIVGMDLYMDQFEDKMTHEDVYLSFLPLAHILDRMNEEYFFRKGAS
VGYYHGDLNVLRDDIQELKPTYLAGVPRVFERIHEGIQKALQELNPRRRFIFNALYQHKL
SWLNRGYSHSKASPMADFIAFRKIRDKLGGRIRLLVSGGAPLSCEIEEFLRVTCCCFVVQ
GYGLTETLGGTALGFPDEMCMLGTVGIPAVYNEIRLEEVAEMGYDPLGEIQAGEICIRGT
CLFSGYYKNPELTQEVMKNGWFHTGDIGEIHPNRVLKIIDRKKNLIKLSQGEYVALENLE
NIYGQNSVVQDIWVYGDSFKSMLVAVIVPNPETVNRWAKDLGFTKPFEELCSLSELHDEH
IILELKSTAEKNKLRKFEYIKAVTVETKPFDVERDLVTATLKNRRNNLLKFYQSANVPLY
RYKSTKCTENCR
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttttcgcggcgaagctggaagaaggagttaaaggaggaaacgggaagccgtcg
gtaggtccggtgtaccggaatcttttgtcggaaaaaggttttccgcctatggattctgat
atcaccactgcttgggacgttttcagatctcttttgggttttgttagtaaatcagtggaa
aaattcccttacaacaagatgcttggatggcgtcgaatcgtcgatgagaaggttggaccg
tatatgtggaaaacttacaaggaagcatacggagaagttctgcagattggttctgcaata
cgtgctctgggagctgagcctgggtgtcgagtggggatctatggagttaattgtcctcag
tggataatagcaatggaggcttgtgcagctcacactctaatctgtgtacctctgtatgac
acattgggttcaggagcagtggattatattgttgatcacgctgaaatcgattttgtattc
gtccaagacaacaagattaaagggcttcttgagccaaattgcaaatgtgctaaacggcta
aaagctatagtttccttcgttaatgtgagtgaagaagatagcctcaaggcttctgaaatt
ggagtcaaaacattctcgtggctcgactttctccgtatgggacgagaaaaaccagaagag
actaacccgcctaagccatctaacatatgcaccataatgtacacgagcggcacgagtggt
aaccctaaaggtgtggttttgactcacgaagcagtggccacttatattgttgggatggat
ctctacatggaccagttcgaagacaagatgacacatgaagatgtgtatctttccttcttg
ccgttggctcatattcttgaccgtatgaatgaggaatacttctttcgcaaaggggcttcg
gttggctattaccatggagatttgaatgtgttacgcgatgacattcaagaattgaaacca
acttatttagctggagttccaagagtgtttgagagaattcacgagggaattcaaaaggct
cttcaggaacttaatcctagaaggagatttatcttcaatgctctctaccaacacaagctt
tcatggttgaatcgtggatactctcatagtaaagcttcgcccatggctgatttcatagct
ttcagaaagattagagacaaattgggaggtcgaatcaggttgctagtatctggaggagca
ccattgagctgtgagattgaagagttccttagagttacttgttgttgctttgtcgtccaa
ggctacggtctaacggagactcttggaggaacggctttgggtttcccggacgagatgtgt
atgctagggacagttggtattccggccgtttacaacgagatacgacttgaggaggtggct
gaaatgggctacgacccactcggggaaattcaggcaggcgagatctgtataagaggaaca
tgtttattttctggttattacaagaaccctgaacttactcaagaagtcatgaaaaacgga
tggttccatacaggagatataggtgagattcacccaaatagagtactcaagataattgat
cgcaaaaagaatcttatcaaactctctcaaggagagtacgttgctcttgagaacttggaa
aacatctacggccaaaactctgttgtccaagatatatgggtttatggagatagcttcaaa
tcaatgcttgtagcagtgattgttccaaatcctgaaaccgtgaaccggtgggctaaagat
ctcggctttactaagccattcgaagaactatgctctctctcggaattacatgatgaacac
atcattttagaactgaagtccacggcagagaaaaacaagctaagaaagttcgagtatata
aaagcagtgacagtggagacaaaaccttttgacgtagagagagacttagtgactgcgacc
ctcaagaatcgaaggaacaatcttctcaagttttatcagtccgccaacgttccattatac
aggtacaagtcgacgaaatgtaccgaaaattgtcgttga
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