Brassica oleracea (wild cabbage): 106329325
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Entry
106329325 CDS
T04124
Name
(RefSeq) RNA-binding protein 8A-B-like
KO
K12876
RNA-binding protein 8A
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03013
Nucleocytoplasmic transport
boe03015
mRNA surveillance pathway
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106329325
09122 Translation
03013 Nucleocytoplasmic transport
106329325
03015 mRNA surveillance pathway
106329325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106329325
03041 Spliceosome [BR:
boe03041
]
106329325
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106329325
Spliceosome [BR:
boe03041
]
Complex C
Other components
EJC/TREX
106329325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
106329325
NCBI-ProteinID:
XP_013623419
UniProt:
A0A0D3BMR1
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All DBs
Position
C3:63066002..63067570
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AA seq
200 aa
AA seq
DB search
MANIEAEAVDFEPEEDDLMDEDVGASDLSPRAGHPRLRSAISGANDESANRKTKGRGFRE
EKDSDRQRRLSSRDFESLGSDGGPGPQRSIEGWIVLVTGVHEEAQEDDISNAFGDFGEIK
SLHLNLDRRTGFVKGYALIEYEKSEEAQSAIKAMNGAELLTKNVSVDWAFSNGPNNAGSY
RRRNMRSGRSQRSRSPRRRF
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacatagaagctgaagcagtcgatttcgagcctgaggaggacgacctcatggac
gaagacgtcggagcatctgatctctccccacgcgctggtcatccgaggcttaggtcagca
atctccggagcaaacgacgaatcagcgaataggaagaccaaaggccgcggatttcgcgag
gagaaagattccgatcgccagcgccgcctctcctcccgcgacttcgaatctctcggttcc
gatggcggtcccggcccccagcgatccattgaggggtggattgttttggtcactggagtt
catgaggaggcacaggaggatgatatctccaatgcttttggtgattttggcgagattaag
agtctgcatctcaatctcgatcgccgtactggttttgtcaagggctatgctttgattgaa
tacgagaagagtgaagaagcacagagtgctatcaaagcaatgaatggtgctgagcttctg
accaagaatgtcagcgttgactgggcctttagcaatggaccaaacaatgctggatcttac
aggagaaggaacatgaggtcggggaggtcacaacggtcacgaagcccgagaagacgtttc
tga
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