KEGG   Brassica oleracea (wild cabbage): 106329325
Entry
106329325         CDS       T04124                                 
Name
(RefSeq) RNA-binding protein 8A-B-like
  KO
K12876  RNA-binding protein 8A
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03013  Nucleocytoplasmic transport
boe03015  mRNA surveillance pathway
boe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106329325
  09122 Translation
   03013 Nucleocytoplasmic transport
    106329325
   03015 mRNA surveillance pathway
    106329325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boe03019]
    106329325
   03041 Spliceosome [BR:boe03041]
    106329325
Messenger RNA biogenesis [BR:boe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106329325
Spliceosome [BR:boe03041]
 Complex C
  Other components
   EJC/TREX
    106329325
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 106329325
NCBI-ProteinID: XP_013623419
UniProt: A0A0D3BMR1
LinkDB
Position
C3:63066002..63067570
AA seq 200 aa
MANIEAEAVDFEPEEDDLMDEDVGASDLSPRAGHPRLRSAISGANDESANRKTKGRGFRE
EKDSDRQRRLSSRDFESLGSDGGPGPQRSIEGWIVLVTGVHEEAQEDDISNAFGDFGEIK
SLHLNLDRRTGFVKGYALIEYEKSEEAQSAIKAMNGAELLTKNVSVDWAFSNGPNNAGSY
RRRNMRSGRSQRSRSPRRRF
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcgaacatagaagctgaagcagtcgatttcgagcctgaggaggacgacctcatggac
gaagacgtcggagcatctgatctctccccacgcgctggtcatccgaggcttaggtcagca
atctccggagcaaacgacgaatcagcgaataggaagaccaaaggccgcggatttcgcgag
gagaaagattccgatcgccagcgccgcctctcctcccgcgacttcgaatctctcggttcc
gatggcggtcccggcccccagcgatccattgaggggtggattgttttggtcactggagtt
catgaggaggcacaggaggatgatatctccaatgcttttggtgattttggcgagattaag
agtctgcatctcaatctcgatcgccgtactggttttgtcaagggctatgctttgattgaa
tacgagaagagtgaagaagcacagagtgctatcaaagcaatgaatggtgctgagcttctg
accaagaatgtcagcgttgactgggcctttagcaatggaccaaacaatgctggatcttac
aggagaaggaacatgaggtcggggaggtcacaacggtcacgaagcccgagaagacgtttc
tga

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