Brassica oleracea (wild cabbage): 106329514
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Entry
106329514 CDS
T04124
Name
(RefSeq) zinc finger protein JACKDAW
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
boe03000
]
106329514
Transcription factors [BR:
boe03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106329514
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_6
DUF7128
C2HC_ASCIZ
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
106329514
NCBI-ProteinID:
XP_013623652
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Position
C3:551528..554757
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AA seq
505 aa
AA seq
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MQMIPGDPFSISSSMGGFVHQEQHIHHLQQHIPELNPNSNPNPSAKPNSSSAKKKRNQPG
TPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVIK
KKVYICPIKTCVHHDSSRALGDLTGIKKHYSRKHGEKKYKCEKCSKKYAVQSDWKAHAKT
CGTREYKCDCGTLFSRKDSFITHRAFCDALTEEGARMSSLSNNPAISTTTSLNFANDSHV
INNPNLPHGFVHRGVHHPDINAAISQFGLGFGHDLSAMHTQGSSEMVQMASTGNHHLFPL
SSSSFLSDFSDHHYNQQFEIPTTSTNPNLTLSSSSTSQQTSASLPSLHQQHQTLKGSSFS
PLFSSSSDKKQNKPLSPMSATALLQKAAQMGSTRSNSTTVPPLFAGPTMTSSSSAASPPP
RSSSPLMIQQELNNFNHNLAPPTSGVTTSSVDNNNPFQSNRSGLNPAQQMGLTRDFLGVS
NENHPHQMGRHPFLPQELARFAPLG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgattccaggagatccattttctatttcatcttccatgggaggctttgtccat
caagaacagcatattcatcatcttcagcagcacatccctgaacttaaccctaattccaac
ccaaaccctagtgcaaaaccaaattcgtcatcagccaagaagaagagaaatcaacctggc
accccagatccagatgcggatgtcatcgctctatcgccaacaaccctcatggcgacaaac
agattcgtctgcgagatctgcaacaaagggtttcaaagggatcagaacttacaactccat
cgccgtggccacaaccttccatggaagctgaagcaacggtcaaacaaagaggtgataaag
aagaaagtatacatatgtcctatcaagacttgtgttcaccatgattcctctagggccctt
ggagacctcactgggatcaagaagcactatagccgcaagcacggggaaaagaagtataag
tgcgaaaaatgttctaagaaatatgctgttcaatctgattggaaggcgcacgcgaaaact
tgtggcactcgtgagtataagtgcgactgtggcacgttgttctccaggaaagatagtttc
atcacacacagagcgttctgcgacgcattaacagaagaaggggcgagaatgagctcactt
agtaataatccagcgatctctacaacaacgagtcttaattttgcaaatgattcacatgtt
ataaataatccaaatcttccccatggatttgtccaccgaggagttcatcatccagacatt
aatgcagctatctctcaatttggtttagggtttggacatgacctaagcgcaatgcatacg
caaggttcctccgaaatggtacaaatggcctccaccgggaaccaccacctcttccccttg
tcttcgtcatcattcctctctgatttctccgaccaccactacaaccaacagttcgaaatc
cccacgacttccacaaaccctaatctcaccttatcatcatcctcaacatcacaacaaacc
tcagcttcactcccatcactacatcaacaacaccaaaccctgaaaggctcttctttctcc
ccactcttctcctcctcctccgacaaaaaacaaaacaagcctctttctccaatgtctgcc
actgctctcttgcaaaaagctgcacaaatgggatccactagaagcaactccaccaccgtt
ccgcccttattcgccggcccaacaatgacttcatcctcgtccgccgcttctcctcctcct
cgatcatcttctccattgatgatccaacaagaactcaacaacttcaaccacaatcttgct
cctcctaccagtggtgtaaccacgagtagtgtcgataataataatccatttcaatcaaat
cggtcaggtctaaacccggctcaacagatgggtttaacccgggattttcttggagtgagc
aacgagaatcaccctcaccaaatgggtcgccatccgtttttgcctcaagaactcgcaagg
tttgctccattgggttga
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