KEGG   Brassica oleracea (wild cabbage): 106329514
Entry
106329514         CDS       T04124                                 
Name
(RefSeq) zinc finger protein JACKDAW
  KO
K25870  zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:boe03000]
    106329514
Transcription factors [BR:boe03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    106329514
SSDB
Motif
Pfam: C2CH-4th_BIRD-IDD C2H2-2nd_BIRD-IDD C2CH-3rd_BIRD-IDD zf-C2H2 zf-C2H2_jaz zf-met zf-C2H2_STOP2_C zf-C2H2_6 DUF7128 C2HC_ASCIZ zf-C2H2_4
Other DBs
NCBI-GeneID: 106329514
NCBI-ProteinID: XP_013623652
LinkDB
Position
C3:551528..554757
AA seq 505 aa
MQMIPGDPFSISSSMGGFVHQEQHIHHLQQHIPELNPNSNPNPSAKPNSSSAKKKRNQPG
TPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVIK
KKVYICPIKTCVHHDSSRALGDLTGIKKHYSRKHGEKKYKCEKCSKKYAVQSDWKAHAKT
CGTREYKCDCGTLFSRKDSFITHRAFCDALTEEGARMSSLSNNPAISTTTSLNFANDSHV
INNPNLPHGFVHRGVHHPDINAAISQFGLGFGHDLSAMHTQGSSEMVQMASTGNHHLFPL
SSSSFLSDFSDHHYNQQFEIPTTSTNPNLTLSSSSTSQQTSASLPSLHQQHQTLKGSSFS
PLFSSSSDKKQNKPLSPMSATALLQKAAQMGSTRSNSTTVPPLFAGPTMTSSSSAASPPP
RSSSPLMIQQELNNFNHNLAPPTSGVTTSSVDNNNPFQSNRSGLNPAQQMGLTRDFLGVS
NENHPHQMGRHPFLPQELARFAPLG
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgcagatgattccaggagatccattttctatttcatcttccatgggaggctttgtccat
caagaacagcatattcatcatcttcagcagcacatccctgaacttaaccctaattccaac
ccaaaccctagtgcaaaaccaaattcgtcatcagccaagaagaagagaaatcaacctggc
accccagatccagatgcggatgtcatcgctctatcgccaacaaccctcatggcgacaaac
agattcgtctgcgagatctgcaacaaagggtttcaaagggatcagaacttacaactccat
cgccgtggccacaaccttccatggaagctgaagcaacggtcaaacaaagaggtgataaag
aagaaagtatacatatgtcctatcaagacttgtgttcaccatgattcctctagggccctt
ggagacctcactgggatcaagaagcactatagccgcaagcacggggaaaagaagtataag
tgcgaaaaatgttctaagaaatatgctgttcaatctgattggaaggcgcacgcgaaaact
tgtggcactcgtgagtataagtgcgactgtggcacgttgttctccaggaaagatagtttc
atcacacacagagcgttctgcgacgcattaacagaagaaggggcgagaatgagctcactt
agtaataatccagcgatctctacaacaacgagtcttaattttgcaaatgattcacatgtt
ataaataatccaaatcttccccatggatttgtccaccgaggagttcatcatccagacatt
aatgcagctatctctcaatttggtttagggtttggacatgacctaagcgcaatgcatacg
caaggttcctccgaaatggtacaaatggcctccaccgggaaccaccacctcttccccttg
tcttcgtcatcattcctctctgatttctccgaccaccactacaaccaacagttcgaaatc
cccacgacttccacaaaccctaatctcaccttatcatcatcctcaacatcacaacaaacc
tcagcttcactcccatcactacatcaacaacaccaaaccctgaaaggctcttctttctcc
ccactcttctcctcctcctccgacaaaaaacaaaacaagcctctttctccaatgtctgcc
actgctctcttgcaaaaagctgcacaaatgggatccactagaagcaactccaccaccgtt
ccgcccttattcgccggcccaacaatgacttcatcctcgtccgccgcttctcctcctcct
cgatcatcttctccattgatgatccaacaagaactcaacaacttcaaccacaatcttgct
cctcctaccagtggtgtaaccacgagtagtgtcgataataataatccatttcaatcaaat
cggtcaggtctaaacccggctcaacagatgggtttaacccgggattttcttggagtgagc
aacgagaatcaccctcaccaaatgggtcgccatccgtttttgcctcaagaactcgcaagg
tttgctccattgggttga

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