Brassica oleracea (wild cabbage): 106330172
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Entry
106330172 CDS
T04124
Name
(RefSeq) vacuolar amino acid transporter 1-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
106330172
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
boe02000
]
106330172
Transporters [BR:
boe02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
106330172
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GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
106330172
NCBI-ProteinID:
XP_013624156
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Position
C3:23812169..23821207
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AA seq
528 aa
AA seq
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MKLEDQESDILFQTDDEESQVDVFCNDEDEISRKSSQLSMNDSAPWPRSYRQSVDILTGV
TPPTTSFIHRRGSQASSFTSSIASLYRRRPNSILNSFASSTSKQPLLTDKDDVSVKSYVS
SQLKLSITDLSYEEQSLCSFPQSILNGINILCGVSLLTMPYAVKEGGWLGLIILFFFGII
TCYTGILLKRCLESSPDIHTYPDIGQAAFGFTGRLIISILLYMELYACCVEYIIMMSDNL
SRFFPNVSLNVAGVSIDSSQIFAIATALIVLPTVWLRDLSLLSYLSAGGVFSSILLALCL
FWVGSVDGVGFHSGGQALDLSNLPVAIGIFGFGFSGHAVFPNIYSSMKDPSKFPLVLIIS
FGFCVVFYIAVAVCGYIMFGEAIQSQFTLSMPQQFTSSKIAVWTAVITPMTKYALTLTPI
VLSLEELMPSSEKMRSNGVSMFLRTILVLSTLVVALAFPFFAIMGALMGSFLSMLLAFIL
PCLCYLSILRGRLSKIQMGVCVLIIIAGIVSGCCGTYSAIGKLVGERS
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgaggatcaagaaagtgacattttgtttcagacagatgacgaagaaagccaa
gtcgatgtcttctgtaatgatgaagatgaaatctccagaaagtcttctcaattatcaatg
aacgattccgctccgtggcctcgaagttatcgacaatctgtagatatcttaaccggagtt
acacctcctacgaccagtttcattcaccggagaggttctcaggcatcatcattcaccagc
tccatcgcttccttatacagaagacgtccaaactctattctaaactcgtttgcttcatcc
acaagcaaacaaccgttgctcaccgataaagacgatgtctctgtcaaatcatacgtatca
tcacagctaaagttatcaatcaccgatctctcctatgaagaacagagtctctgctcgttt
cctcaatccattctcaacggaatcaatatcctatgtggagtaagtctactcacaatgcct
tacgcagtgaaagaaggaggatggctagggcttattatacttttcttcttcggtatcatc
acttgctacaccggtattctcctcaagagatgtcttgaaagctctcctgacattcatacc
tatcctgacattggtcaagctgcctttggcttcactggacgtctcatcatctccatactt
ttgtacatggagttatacgcatgttgtgtggagtatattatcatgatgagtgataacttg
tcgagattcttccccaacgtttcgttaaacgtcgctggagtatctattgactcttcgcag
atctttgccatagcaactgctcttattgttcttcctacagtttggcttagagacctaagc
ttactctcctatctctcagctggaggtgtcttctcatccatcttgctagctctttgtctc
ttttgggtcgggtctgttgatggagtcgggtttcactcaggtggacaagctctagatctt
agtaacttacctgtagccattggtatatttgggtttggtttcagtggacacgcggttttc
ccaaacatatactcttctatgaaagatccatccaagtttcctttggtgctcatcattagt
ttcggtttctgcgtagtcttctacatagctgtggcggtttgcggctacatcatgtttggt
gaggcgattcagtcgcagtttacgctaagcatgccacaacaattcacgtcatctaaaatc
gcagtttggaccgcggtcattacaccgatgactaaatacgccttaactcttacaccgatc
gtgcttagcttagaagaactaatgccttcttcagaaaagatgagatccaatggagtatca
atgtttcttagaacgatcttagttctctctaccttggttgtcgcacttgcattcccattc
ttcgccatcatgggagctttgatgggatctttcctctcaatgcttcttgcttttatactt
ccatgtctttgttatctgagtatcttgaggggtagattgagtaagatacaaatgggagta
tgcgttttgatcatcatcgctggcattgtaagtggttgctgtgggacttactctgcgatt
ggaaagttagtaggagaaaggagttga
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