KEGG   Brassica oleracea (wild cabbage): 106330948
Entry
106330948         CDS       T04124                                 
Name
(RefSeq) rhamnogalacturonate lyase-like
  KO
K18195  rhamnogalacturonan endolyase [EC:4.2.2.23]
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    106330948
Enzymes [BR:boe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.23  rhamnogalacturonan endolyase
     106330948
SSDB
Motif
Pfam: Rhamnogal_lyase CBM-like fn3_3 CarboxypepD_reg RhgB_N CarbopepD_reg_2 Pam16
Other DBs
NCBI-GeneID: 106330948
NCBI-ProteinID: XP_013624788
LinkDB
Position
C3:54308672..54312177
AA seq 682 aa
MSPQTSYSYIKFDLEIWKKKMISQKTIASWMICFLLLLLLPIAFSEPTRNLKGTSARAPT
VQQIRNKEVIVDNGIVRVTFSNPEGLITGIKYNEIGNVLNPYLRARGYWDITWQRENNIL
PTLDRIEGTNFRIITQNEEQVEISFSRTWNGGSDHIPLNVDKRYIIRTNTSGIYTYGIFE
RQPEWPEVEMGLIRVAFKLNPDRFHYMVVADNRQRQMPTDDDRDIHSGRAKPLAYKEAVQ
LTNPHNQMFKNQVDDKYQYSCEVKDNKVHGWISTKSNVGFWLISPSGEYRSGGPVKQELT
SHVGPTTLTTFISQHYVGQDMETRYKTGEAWKKVLGPVFIYLNSDSTGNNLQHSLWEDAK
RQTEQEVEAWPYGFVASSDFPTRQERGTITGRLFVNDRFLAPAGYAYIGLAPPGEAGSWQ
TNTKGYQFWTQTNETGYFTISNVRPGTYNLYGWVHGFIGDFKYQNLVNVAAGSEICLDRV
VFQPPRNGPTLWEIGVPDRTAREYFVPEPYQNTMNPLYLNHTDKFRQYGLWQRYTELYPN
HDLVYTVGVSNYSQDWFYAHVTRNIYGSTYVPTTWQIVFELPYVNWRGSYTLQLALASAA
RANLQVRFNNEYSRPLFSEGIGRDNAIARHGIHGAYHLYSIDVPGRLLRTGTNTIYLRQS
KAVGAFEGLMYDYIRLEEPSIA
NT seq 2049 nt   +upstreamnt  +downstreamnt
atgtctccacaaacatcttattcttacattaaattcgatcttgagatttggaaaaagaag
atgatttcgcagaagacgatagcttcgtggatgatatgtttccttctgttgcttcttctt
ccgatagctttttctgagccgacaagaaacttaaagggaacaagtgcaagagctccaaca
gtgcagcagataagaaacaaagaggtgatagtggacaatggaattgtgagagtgactttc
tcgaatcctgaaggattaataactgggatcaaatacaatgaaatcggcaatgttcttaat
ccatatctccgagctcgagggtactgggacataacatggcaaagagaaaacaacattctc
ccaacgttggatagaatcgaaggaaccaactttagaatcataactcaaaacgaagaacaa
gtggagatttctttctcccgaacatggaatggtggttctgatcatattccattaaacgta
gacaagaggtatattatacgtacaaatacttcaggaatctacacttatggaatttttgag
agacaacccgaatggccagaagtggagatgggtctaattcgagtcgcctttaaactcaac
cctgatagatttcattacatggtggtggcagataatcggcaaagacaaatgccaacagac
gatgaccgtgacatccacagtggccgtgccaagccccttgcttacaaagaggctgtacaa
ttgactaatcctcacaaccaaatgttcaaaaaccaggtggatgataaataccagtactca
tgtgaggtcaaggacaacaaggtgcatggttggatatcgaccaagtccaatgttggtttc
tggcttatctcaccgagcggtgaataccgctctggtggaccggtcaaacaggagctcacg
tctcacgtcggtcccacgacccttacgacctttataagccagcattatgttggtcaggac
atggagacaaggtacaaaactggtgaagcgtggaaaaaggtcttgggacctgtattcatt
tacttaaactctgattctaccggcaataatctacaacattcgttatgggaagatgctaaa
cgacagaccgaacaagaagttgaagcatggccgtacggttttgtagcgtcctctgacttt
cctactcgtcaagaaagaggaaccattaccggtcgactctttgtcaacgacaggttcttg
gctccggcaggatatgcatacatcggtttagcaccgccaggagaagctggttcttggcaa
acaaatactaagggataccaattttggacacagacgaatgaaaccggctatttcaccatt
tctaacgttagaccgggaacgtataatctatacggatgggttcatggttttatcggagac
ttcaaataccaaaacctagttaacgtagctgcaggttcagagatatgtcttgatagagtt
gtgttccagcctcctaggaatggtccaacgttatgggagattggtgtaccggaccgaacc
gccagagaatactttgtaccggaaccataccagaatacaatgaaccccttatacttaaac
cacactgacaagtttaggcagtatgggttatggcaacgttacacggagttatatccaaac
catgatctcgtctacacagttggagttagtaactatagtcaagactggttctacgctcac
gtcacaaggaacatttatggttcgacctatgtaccaacgacatggcagattgtttttgaa
cttccatatgtgaactggcgaggtagctacacattgcaactagctttagcttcggctgca
cgggctaacttacaagtacggttcaacaacgaatactctaggccattgttctctgagggt
atcggaagagataatgctatagcaagacatggaatccatggagcctaccatctttatagc
attgatgtacctggaaggttactaagaaccgggaccaacacaatctatctacgtcagtct
aaagcggtgggagcgtttgaaggtcttatgtatgattacattcgtcttgaagagccttct
atagcttag

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