Brassica oleracea (wild cabbage): 106331105
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Entry
106331105 CDS
T04124
Name
(RefSeq) probable E3 ubiquitin ligase SUD1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106331105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106331105
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106331105
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
106331105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
106331105
NCBI-ProteinID:
XP_013624900
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Position
C3:complement(59755408..59758604)
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AA seq
851 aa
AA seq
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MARYIDDEQEDDEDVCRICRTPGDADNPLQYPCACRGSIKFVHQDCLLQWLSYSKAHRCE
VCKHHFSFSPLYDEKAPTRLPLKEFVVGIAMKVWRCRVSHASLRLSLMLLACLLTVSFIT
FWTWRLAFVQSFVEARRLFLSHMSTLLVLTDCLLGFLVSATIIFILLKAASLRNFFRHLG
RNFLFNELVRIQSPLFHLAMIVFVIVACNMIFVGVVIFVPFTLGRVILHHVAAADLLKGF
VAVPSKLYDDVTTLTVANMFAVFLYLGIIVLIRYFKGQQPLNFDRLYGVAAASIIETIPP
LLRQLLVGIKVGTMVAYYFGVFPLMCGWWLDVCTVSMFGETMSNRVEFLSVSPLARSLVH
WAVGVLYLSKICICEDLLLKVLRREALFFLYDPKDDDDVESFQFMIEEPVHKLARDVLLD
AAKYGSLIVLLVFLPVKLAIMMAPSVFPLDISVSDPFTEIPVGILLFTICTQFIIEHFGL
WTTVKSLVRCWFTSVCWALGLTDLLLPRPEDKVGQDNGDGEPGRQNRGPERAMDVLPATV
DPNRSLVLAGNVEKSHSEYIFVLRVVLLLLAAWVTPLLFNTALIVVPVSLGRALFNAIPT
FPITHGIKCNDLYGFVIGTYAFWIIISGTMYATEHLKSERTSVLLNQIWRWCGIVFKSSV
LLAIWIFIIPVLIALVLELLVIVPMRVPVDETPVFLLYQDWALGFIFLKIWTTLIILLDD
SWKAKFERVEEDGFSRLQGLWVLKEIVSPILMKLLTALCVPYVLAKGVFPMLGCPLVVNS
AVYRFAWIGCLSASFFFSCAKRCHVWFINLHNSIRDDHYLVGRRLLNFEEVALAKRKSSA
SEDDGEGDGDT
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggtacattgatgatgaacaagaagatgatgaggacgtttgcagaatctgcaga
actccaggggatgcagacaatccacttcaatatccatgcgcctgcaggggaagcatcaag
tttgtgcaccaagattgcctccttcaatggcttagctactccaaagctcatcgatgcgag
gtttgcaagcatcatttttcattctcaccgctttatgatgaaaaggctcccacgaggctc
cctttgaaggagtttgttgttggcattgcgatgaaagtttggcgttgccgtgtttcgcac
gcctcactgcggttgagtttaatgcttttggcctgtcttctcactgtttctttcatcacg
ttttggacatggagattggctttcgtccagagttttgttgaagctcggaggctgttctta
agtcacatgtccaccttacttgtcctaacagattgtttgcttggtttcttagtatctgca
actatcatcttcattctccttaaagctgcttcactgaggaacttctttaggcatttggga
agaaactttctatttaacgagctggttcgaatacagagtcctctgtttcacttggctatg
attgtctttgttattgtggcatgcaatatgatatttgttggtgttgtcatctttgtgccc
ttcacactaggacgggttatattgcatcatgttgctgctgctgatctcttgaaaggtttt
gttgctgtaccatcaaagctatatgatgatgttacaactctaactgttgcaaacatgttt
gcagtcttcctttaccttggaatcattgtgctgattcgatatttcaagggccagcagcca
ttgaactttgatagactctatggtgttgctgctgcttcaataatagaaactataccacct
ctccttaggcagttgttggtaggaatcaaagtaggaaccatggttgcctattattttggg
gtcttccccttgatgtgtgggtggtggctagatgtttgcacagttagtatgtttggtgaa
actatgtccaacagagtagagtttttatcagtttccccgcttgcacgctcacttgttcat
tgggctgttggagtgttgtacttgtcaaaaatatgcatatgcgaggaccttcttctaaag
gttcttcgccgtgaagctttgtttttcctttatgatcccaaagatgatgatgatgttgag
tcgttccagttcatgatcgaagaaccagtacacaaacttgctcgggatgttttgttagat
gctgcaaagtatgggagtttgattgtcttgctggtgtttttaccagtcaagcttgcgatc
atgatggctccttcggtcttccctcttgacatatctgtatccgacccattcactgagatt
cctgtcggcattctcctgtttacaatatgcacacagtttatcatcgagcattttggactc
tggaccacggttaagtcccttgtacgctgctggttcaccagcgtctgttgggcgcttggt
ttgacagacttactcttgccaagaccagaggacaaggtcggtcaggacaatggagatggt
gaaccaggaaggcagaacagaggacctgaaagggccatggatgtgcttccagcaactgtt
gacccaaacagaagcctcgtcctcgctgggaatgtagaaaaatctcattcagagtacatc
tttgtgctccgtgtagtccttcttctacttgctgcatgggttactcctcttctcttcaat
acggcattgatagttgtaccagtttctctaggacgtgctctatttaatgccatcccaact
ttccctataacgcatggcatcaagtgcaatgacctatatggttttgtcattggcacatat
gccttttggattatcatatctgggaccatgtatgctaccgagcatttgaagtcagaaagg
acttcagtcttgctcaaccaaatatggagatggtgtgggattgtcttcaagagctcggtc
ctgttagccatatggatttttatcattccagtgctgatagcacttgtgcttgagctattg
gtgattgtcccaatgagagtcccagtagatgaaactcctgtcttcctcctgtatcaagac
tgggctcttggcttcatctttttgaaaatctggacaacattgataatattgctggatgat
agttggaaagcaaagtttgagagagtagaagaagatggattctcaaggcttcaagggtta
tgggtgcttaaagagattgtatctcctatcctgatgaaacttctgacagcattatgtgtg
ccttatgtcctggcgaagggagtgttccccatgctcggatgtccactggttgtgaactcc
gccgtctacaggttcgcttggataggttgcctctctgcgagtttcttcttttcttgtgca
aagagatgtcatgtctggttcataaaccttcataactctatccgtgatgaccattatctc
gttggtcggagactccttaactttgaggaagttgctttggctaaacgaaaaagcagtgcc
agtgaggatgatggtgagggagatggtgatacttga
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