Brassica oleracea (wild cabbage): 106331352
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Entry
106331352 CDS
T04124
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106331352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boe03009
]
106331352
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106331352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_22
AAA_5
TIP49
AAA_33
AAA_28
RNA_helicase
AAA_2
AAA_17
AAA_14
nSTAND3
AAA_18
NPHP3_N
IstB_IS21
Rad17
ATPase_2
Mg_chelatase
Vps4_C
Viral_helicase1
ABC_tran
AAA_19
TsaE
Cytidylate_kin2
Zeta_toxin
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
106331352
NCBI-ProteinID:
XP_013625140
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All DBs
Position
C3:complement(9521215..9524335)
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AA seq
738 aa
AA seq
DB search
MGRRGVDGRNNKRDLSRAMDWCGKDLSTAEEIVDDLRSRYGKYARLTRQALVLNVRNVLN
ARNNNKKRVKEDEEEDDNNDSDEGTGGKMKKQRRLEDKSVSSSSLEDSDGHISTSEDAKV
SPRFDLINVSLRNQFLWRRMSKESPSPPPPEGPTFKDFAGIKKVLNQLDQYILSPLLNPP
VFWKIGAKPPSGILFHGPPGCGKTRLANAVANEAGVPFYQISATQVLSGVSGESEENIRE
LFSKAYRTAPSIVFIDETDAIGSKRENQQREMEKRIVTQLLTCMDGPPPGDTAAGYVVVI
GATNTPDALDPALRRGRRFGREIALTAPDEHAMAEILSLVAQRLRLEGSFNMKRIARLTP
GFVGADLEELADMAASLCVKRIMDSRKMQLSGDSDDDDDRSWLRLPWSDEDLDKLFVRMS
DFEEAVKLVKGSLTREGFSTVPDVSWDDVGGLGHLRSELNNYIVRPIKYPDMYEKFGKTL
ETGFLLYGPPGCGKTLVAKAVANEAGANFIHIKGPELLNKYVGESERAIRTLFQRARTSS
PCVIFFDEVDALTGRRGREGDHLVVGGLLNQFLTELHGGDRRDVYVIGATNRLDEIDRAF
LRPGRFANPVYVPLPNADERVSILKSIAKKRPIDPSVDLDATATKYCEDFSGADLANLMD
KAIHVAVKEKIQSCESSEDGDMDLSDCTIKMTHFKQALSLVTPSVSKQQIKHYEEQRDTL
QSSTNMDEINVGPSFTLE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggggaggagaggtgtggacggaagaaataataagagagatttgagtcgagctatggat
tggtgcgggaaggatttatctacggcggaggaaatcgtggacgacctccgttccaggtac
ggtaaatatgcgaggttgacccgtcaagcacttgtcctcaacgtcagaaatgtccttaat
gcccgaaacaacaacaagaagcgtgtgaaagaagacgaagaggaagatgacaacaacgat
tccgatgaaggtactggtggtaagatgaagaaacagagacgtcttgaagacaagtcagtt
tcttcttcttcgttggaagacagtgacggtcatatctcgacttctgaggacgctaaggtg
agtccaaggtttgatttgatcaatgtcagcttaagaaaccaattcttgtggagacgaatg
tcgaaggaatctccttctcctccacctccagaaggacctacttttaaagactttgccggg
attaaaaaagtgctgaatcagttggatcagtatattctgtcccctcttctcaatcctcct
gtgttttggaagattggagcgaagccaccaagcgggattctattccatggaccacctggc
tgtggaaagactcgcttggccaatgccgtcgccaacgaagctggtgttcccttttatcag
atttcagccacacaagttctttctggtgtttctggtgagtctgaagagaatattagagag
ctcttctctaaagcatacaggactgcgccttctattgtgtttatcgatgagactgatgca
attggatctaagagagagaaccagcaacgggagatggagaagcggatcgtaacacaacta
ttgacttgtatggatggcccccctccgggagatacggcggctggatatgttgttgttatt
ggagctactaatacgcctgatgctcttgatcctgctctgagaaggggtaggcgatttggg
cgtgagattgctctaaccgctcctgatgaacatgccatggctgagattctctctctcgta
gctcaaagacttagacttgaaggttcctttaacatgaaaagaatcgctcgcttaacacca
ggttttgttggagctgatttggaagagttagctgacatggctgccagtctttgcgtaaag
aggatcatggattcaagaaaaatgcaactctccggcgacagtgatgatgatgatgataga
tcttggctgaggctgccctggtcagacgaagatttggataagctctttgtcagaatgtct
gattttgaggaagcagtcaagttagttaagggatctttaactagagaaggtttctctacc
gtgcctgatgtctcatgggatgatgttggtgggcttggccatctacggagtgaactcaac
aattacatagtcaggcctatcaaatatccagacatgtatgagaaatttggaaagacgtta
gagacaggtttcttgctctatggaccaccgggttgtggaaagactttggttgcaaaggca
gttgcaaacgaggcaggagctaatttcatacacatcaagggtccagaacttttaaataaa
tacgttggagaaagcgagcgtgctattcggaccttgtttcagcgcgcccggacaagctca
ccatgtgtaatcttctttgatgaggtggatgctttgacaggaaggcgtggcagagaaggt
gatcatttggttgttggtggtcttttgaaccagtttctcactgagctgcacggtggagat
agacgtgacgtttatgtcatcggagctacgaacaggctcgatgaaattgatcgtgctttc
ttgagaccaggtaggtttgcgaatcctgtgtacgtacccctccctaacgcggatgagcgt
gtttcgatcctaaaatctattgcaaagaagagacccatagatcctagtgttgatctggat
gccactgcaaccaagtactgtgaagatttcagcggagctgatctcgctaacctgatggac
aaagctatacacgtggcagtgaaggagaagatccagtcctgtgagtcgtctgaagatggc
gatatggatttaagtgattgcaccatcaagatgactcatttcaagcaagccttgtcctta
gtcacaccatctgtcagcaaacagcaaataaaacactacgaggaacaacgggatacacta
caaagcagcaccaacatggacgaaatcaacgtaggaccatcttttaccctcgagtga
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