Brassica oleracea (wild cabbage): 106331804
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Entry
106331804 CDS
T04124
Name
(RefSeq) protein FIZZY-RELATED 1-like
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106331804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106331804
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
106331804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
WDR55
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
eIF2A
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
NBCH_WD40
Aldo_ket_red
Beta-prop_HPS5
Beta-prop_WDR75_1st
Tricorn_2nd
Beta-prop_SCAP
Beta-prop_Vps41
MIOS_WD40
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
106331804
NCBI-ProteinID:
XP_013625671
UniProt:
A0A0D3B877
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Position
C3:complement(19148533..19151196)
Genome browser
AA seq
485 aa
AA seq
DB search
MEERSSKRIKPTMEEDEEDPSSSSSQLNLPPSMNRPTVSLETQRINRLIHSDHYHSPSKP
IYSDRFIPSPSGSNFALFGLEPSPKKDGKEDGPGSYAGMLRTVLFGPETPEKADVVTGFS
PSSRNIFRYKTGTQRPVNSFPPFGCDEGPSVSRSPVKSPRNILKSAYKVLDAPALQDDFY
LNLVDWSAQNVLAVGLGSCVYLWNASSSKVTKLCDLGGDESVCSVGWALRGTHLAIGTSS
GTVEIWDALRCRRIRTMGGHRLRVGAVAWSSSVLSSGSRDKKILQRDIRSQKDHVSKLTG
HRSEVCGLKWSYDNRELASGGNDNKLLVWNQHSTKPVLRYCEHTAAVKAIAWSPHLHGLL
ASGGGTADRCIRFWNTKTNTRLSCVDTNSQVCNLAWSKNVNELVSTHGYSQNQIIVWKYP
TMSKLATLTGHTFRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPKSQRRESGIGALSFG
RTTIR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaagaagcagcaagagaatcaaaccaaccatggaggaggacgaagaagatcct
tcatcttcatcatctcagctaaacctcccaccgtcaatgaatcgaccaacggtctcacta
gagacccaacgaatcaaccgtttaatccattccgaccactaccactctccctccaaacca
atctactccgaccggtttatcccgagcccatccggttctaatttcgctcttttcggcctc
gaaccttcccccaagaaggacgggaaagaagatgggcctggctcttacgccggtatgctc
cgaaccgtgcttttcggaccggagacgccggagaaagcagatgtcgttactgggttctct
ccttcttcaaggaatattttccggtataagacggggacgcagcggccggtgaactcgttt
ccgccgtttgggtgtgatgaggggcctagtgttagccgtagtccggttaagtcgccgagg
aatattctcaagtctgcttataaggtattggatgcgccggctctgcaagatgatttttac
ttgaatctcgtggattggtctgcgcaaaatgtacttgcagttggattagggagctgcgtt
tatttgtggaatgcttctagtagcaaggtaactaagttatgcgatctcggtggcgatgaa
agtgtttgctcagtgggttgggcactacgtggaacacatttggctattggaactagtagc
ggaaccgtagagatttgggatgcgttacgctgcaggagaataagaacgatgggaggacac
cggctaagagtaggagccgtggcatggagctcatctgttttatcttccggtagcagagac
aagaaaatacttcagagagacatacgttctcaaaaagatcatgtcagtaagctaacaggt
cacagatccgaagtctgcggactcaaatggtcttacgacaaccgcgagctagcatcaggc
ggaaacgacaataagcttctcgtatggaaccaacattcaacaaaaccggttttgagatac
tgtgaacacacagcggcggttaaagccattgcttggtctccgcatcttcatggacttctt
gcttcaggtggcggcactgctgatagatgtatccgtttctggaacacgaagacaaacact
cgtttaagttgcgtggacactaacagtcaggtgtgtaatttggcttggtccaagaacgtg
aacgagcttgtgagcacgcatggatattcacaaaatcaaatcatcgtttggaaataccca
accatgtctaaattggcaactctgacgggtcacacgtttcgtgttctgtatcttgctgtt
tcacccgatggacagacgatcgttacaggagcaggagatgaaacgttaagattttggaat
gtgttcccttcccctaaatctcagcgcagggagagcgggattggggccctgtcctttggg
agaacaacaatccggtga
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