KEGG   Brassica oleracea (wild cabbage): 106332090
Entry
106332090         CDS       T04124                                 
Name
(RefSeq) splicing factor 3B subunit 6-like protein
  KO
K12833  pre-mRNA branch site protein p14
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106332090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:boe03041]
    106332090
Spliceosome [BR:boe03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    106332090
 Complex B
    106332090
 Complex C
   U2 SnRNP specific factors
    106332090
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7 RRM_MUD2_C RRM_10 DUF8400 RRM_ACIN1 RRM_8
Other DBs
NCBI-GeneID: 106332090
NCBI-ProteinID: XP_013626016
UniProt: A0A0D3B0S2
LinkDB
Position
C3:complement(2764648..2765233)
AA seq 124 aa
MTTISLRKQNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGCNKDTKGTA
FVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKNEEEVAKLQEKYGVS
TKDK
NT seq 375 nt   +upstreamnt  +downstreamnt
atgacgacaatcagtctccgcaagcaaaacacgaggctcccacctgaggtgaaccgcgtg
ctctacgttcggaacctcccgttcaacataacgagcgaggagatgtacgatatcttcggc
aagtacggcgcgattcgccagattcgaatcggatgcaacaaggacacgaaaggaacggcc
tttgtcgtgtacgaggatatctacgatgctaagaacgccgtggaccatctatcgggtttc
aacgtggcgaatcggtacctgatcgtgctctactaccagcacgcgaagatgagcaagaag
ttcgatcagaagaagaatgaagaagaggttgctaagttgcaggagaagtatggtgtctct
accaaagataagtga

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