Brassica oleracea (wild cabbage): 106332315
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Entry
106332315 CDS
T04124
Name
(RefSeq) uncharacterized WD repeat-containing protein C17D11.16-like isoform X1
KO
K14791
periodic tryptophan protein 1
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boe03009
]
106332315
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
90S particles
Other 90S particles
106332315
Pre-60S particles
Other pre-60S particles
106332315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
MIOS_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_2nd
BBS2_Mid
DsbA_N
NBCH_WD40
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
106332315
NCBI-ProteinID:
XP_013626239
LinkDB
All DBs
Position
C3:56370302..56384831
Genome browser
AA seq
513 aa
AA seq
DB search
MGTSSFPNTAITTKFLKLFAMNLVGPSKTTELLTVRMITAFSWVPKGAAKAIPDRAELPS
KEEIEKLKETCDQVYSEDEEDNTEDEKENGEVAHAKTIAEAFGKSSRSKNASSSIEVDDL
NDDFMKELDMDNYDEEDYRIEILSSGNGGLYYASNEMDPYLMNHDDSDDSDEDEDQTILP
TKSIIVCAKTDDNDASYLDVCVCEETSNGYPNIYSRGRFELPTAPLCTAWLDCPLKGGEK
GNFLAVGLYKKPMIEIWDLDVKDEVLPCVQLGGKEKGHYKEGSHTRSVLGLAWNREFRNT
LASSSADKKVKVWDMATEKCMITMEHHTKKVQAVAWNHYAPEVLLSGSFDQTVVLNDGRK
PSHSGFKWSVMSKVESLAWDPHSEHSFVVSLKNGTVKVFDVRQASNSASDLKPSFTLQAH
HKPATCVSYNISAPNLLATGSMDKTVKLWDLSDNKPSCIASHIPNAGSLFSIDFSPDNPF
LLAIGGTRGDLKVWDTLSDTNVSRRYGSSRARP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgggaacttcaagcttcccaaacactgcgataacaacgaagttcttaaagctctttgca
atgaatctggttggaccgtcgaagacgacggaactacttaccgtaagaatgataactgca
ttttcatgggtaccaaaaggggctgcaaaggccatacctgatcgtgctgaacttccttct
aaggaggaaatcgaaaagctcaaagagacttgtgatcaagtttacagtgaggacgaagaa
gacaatactgaggatgaaaaagagaatggtgaagttgctcacgcgaaaacaatagcagaa
gcttttggaaaatcttccagaagcaagaatgcttcttcttcaattgaggttgatgactta
aatgatgattttatgaaagaactcgacatggataattacgatgaagaagattatagaatt
gaaattcttagctccgggaatggaggtctttattatgcgagcaatgagatggatccatat
ctcatgaatcatgatgatagtgatgactcagatgaagatgaggaccagacaatcttacca
accaagtcaataattgtctgcgctaagaccgacgacaatgatgctagctatcttgatgtt
tgtgtatgcgaggaaacatcgaatggttacccaaatatttatagtcgtggtagatttgaa
ttgccaacagctccgttgtgtactgcttggcttgattgtccacttaaaggaggagaaaaa
ggaaatttcttagctgttggtttgtataagaagcccatgatagagatatgggatcttgac
gttaaagacgaggtgttaccttgtgtacaactaggaggaaaagagaaagggcattacaaa
gaaggtagccacactagatcagttcttggtcttgcttggaatagggagtttcgaaacact
cttgctagttctagtgctgacaaaaaggttaaagtttgggatatggctactgaaaaatgt
atgattactatggagcatcacacaaagaaggttcaagcggttgcttggaatcattatgct
ccagaagtgcttcttagtgggtcgtttgaccagactgttgtattgaatgacggaagaaag
ccttcacactcgggtttcaaatggtcagtcatgtccaaagtagaaagcttggcctgggat
ccacacagtgaacattcctttgtggtaagtcttaaaaatggaactgtaaaggttttcgat
gtacgtcaagcctcaaattcagcctctgatttaaaaccaagtttcactctccaagcacat
cacaaaccagccacctgcgtctcatacaacatttcagcgcctaatcttttggcaacgggg
tctatggataaaacggttaagctctgggatctttcagacaacaagccttcatgcattgct
tctcacataccaaacgctggaagcttattttccattgatttctctccggataatcctttc
ttactcgctatcggtggcacaaggggggatctaaaagtttgggacacactttctgacaca
aatgtctcccgtagatacggaagcagccgagcccgaccataa
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