Brassica oleracea (wild cabbage): 106332340
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Entry
106332340 CDS
T04124
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 10, mitochondrial-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00900
Terpenoid backbone biosynthesis
boe01100
Metabolic pathways
boe01110
Biosynthesis of secondary metabolites
Module
boe_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
106332340
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
boe01006
]
106332340
Enzymes [BR:
boe01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
106332340
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
106332340
2.5.1.29 geranylgeranyl diphosphate synthase
106332340
Prenyltransferases [BR:
boe01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
106332340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
CCSER
Motif
Other DBs
NCBI-GeneID:
106332340
NCBI-ProteinID:
XP_013626262
UniProt:
A0A0D3BCB5
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All DBs
Position
C3:28635629..28636941
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AA seq
355 aa
AA seq
DB search
MGTKEALVYTLICFLLSLLLLFWRFLWLSYIAVTSTTQLTSHHNPSTSHSLTSESDESEF
MAYMLRKSKSVNKALDGAVPLCEPVLKIREAMRYTLLSNGKRVRPMLCLAACELVGGHES
TAMSFACALEMIHASSIILDDLPCMDDDSLRRGKPTNHKVFGEDSAVLASVALIGLAVKQ
TSSSPDVPPERVLRAVQVMMRAVGTEGLVAGQAEDLAGEGMSFEENEAALEHLEFIHIHK
TASLLEAAAVVGAIMGGGSDEEIERLGKYARCVGLMFQVVDDVLDVTKSSEELGKTAGKD
VMAGKLTYPKVMGVEKSREYAERLNREAREHLRGFDSDKAAPLLFLADYIVNRQN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgggaactaaagaagctcttgtttacactctcatctgcttccttctctctctgctactc
ttgttttggagattcctatggctctcttacattgctgtcacatctacgacacagctaacc
agccaccataatccctcgaccagccattctctgacctctgaaagcgacgaatctgagttt
atggcctatatgctccgtaagtctaagtccgtcaacaaggcactagacggcgccgttcca
ctttgcgagccagtactcaagatccgtgaggccatgaggtatacgcttctctccaacggc
aaacgcgtaagaccaatgctttgtttggctgcatgcgagctcgttggcggccatgagtca
accgcaatgtcttttgcgtgtgcacttgagatgatccacgcgtcgtctatcatcttagac
gacctcccttgcatggacgacgacagcctccgccgcggaaaacccaccaaccataaagta
tttggcgaggatagcgccgttttggcctctgttgcgctcataggtttggccgtcaaacaa
acctcttcatccccggatgttcctccagagagagttctccgggcggttcaggtgatgatg
cgagcggtgggaacagaaggactcgttgcgggacaagcggaggatcttgccggagaaggg
atgagcttcgaggaaaatgaagcggcgctggaacatcttgagtttatacatattcataaa
acggcgtcgctgcttgaagctgctgcggtggtgggagccataatgggaggtggctctgat
gaggagattgaaaggcttgggaaatacgcgaggtgcgttgggctgatgtttcaagtggtg
gatgatgtgctcgacgtgactaagtcgtcagaggagctggggaaaaccgcaggtaaagat
gtgatggctgggaagctgacgtatccgaaagtgatgggagtggagaagtcgagagagtat
gcagagaggttgaacagagaagcgagagagcatcttcgtgggtttgattcagacaaggca
gctcctctgttgtttctggctgattacattgtcaacagacaaaactga
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