Brassica oleracea (wild cabbage): 106332491
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Entry
106332491 CDS
T04124
Name
(RefSeq) probable pectate lyase 7
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00040
Pentose and glucuronate interconversions
boe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106332491
Enzymes [BR:
boe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
106332491
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
106332491
NCBI-ProteinID:
XP_013626409
UniProt:
A0A0D3B9A7
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Position
C3:21817104..21819479
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AA seq
473 aa
AA seq
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METARLFKLVCVICIASLIPTLRANVAETDDYWVKMANEARKRTLMAYHPDPYQIVDHFH
ERHYDNSTDVEETEEHASEEEDDIEMSSSPTNSTRRSLRGRGRGKGKGRGKWSKLKGPCT
ASNPIDKCWRCQPDWARRRKKLVKCVRGFGYRTTGGKRGRIYVVTSNRDDDTVNPRPGTL
RHAVIQNEPLWIIFKHDMSIRLSQELMINSHKTIDARGTNVHIAYGAGITMQYVRNIIIH
GLHVHHIVPGSGGMIRNSNDHFGFRGQADGDGISIFGATNIWLDHISMSKCQDGLIDAIM
GSTGITISNSHFTHHNDVMLLGAQNDNHADKKMQVTVAFNHFGKGLVQRMPRIRWGFVHV
VNNDYTHWELYAIGGSQSPTILSHGNRFIAPPHIQHYREVTKRDYAPESEWKNWNWRSDK
DIFMNNAYFRQSGNPKFMCSHSRQQMIKPKHGSAVSKLTKYAGALDCRVGKPC
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggagacggctaggcttttcaaattagtgtgtgtgatttgtattgccagtttgattccg
accttaagagccaatgttgcggagaccgatgattattgggtaaaaatggctaatgaagct
cgtaaacgtacccttatggcttatcatcccgatccttatcagattgtcgaccacttccac
gaacgtcactacgacaactctactgatgttgaggagacggaggaacacgcatccgaggaa
gaggacgacattgagatgagttctagtccgacgaacagcacaagacggagcctaagaggt
agaggtagaggtaaaggtaaaggtagagggaaatggagcaagctaaagggaccttgcact
gcaagtaaccctattgataaatgttggcgttgccagcccgattgggccaggcgtcgcaag
aagctcgtcaaatgtgttcgtggcttcgggtacaggaccacaggaggcaaacgcggtcga
atctacgtggtcactagcaacagagacgatgatacggtgaaccctagacccggaacattg
cgtcacgctgtgattcagaacgaacctctctggatcattttcaagcacgatatgagcatt
aggttgagccaagagctaatgattaatagtcacaagacgatcgatgctcgtggcactaac
gtgcacatcgcatatggtgctgggatcacgatgcagtacgtgcgaaacatcatcatccat
gggcttcacgtccatcacatcgtcccgggcagtggtggcatgataagaaactctaatgac
cactttgggtttagaggacaggccgatggagatggtatctctatctttggagcaacaaac
atttggcttgaccacatttctatgtctaaatgccaagatggtctcatcgacgctataatg
ggctccaccgggatcactatctctaactctcatttcacccaccacaacgatgtgatgttg
cttggtgcacaaaatgataaccacgcggacaagaagatgcaagtcactgtggctttcaac
cactttggtaaaggacttgtgcagaggatgccgaggattcggtggggtttcgtccatgtt
gtcaacaatgactatactcactgggagctttatgctatcggcggtagccaaagtcctacc
attctcagccacggaaaccgtttcatcgctcctcctcacatacaacattacagagaggtg
acaaagagggattatgctccagaatcggagtggaaaaactggaattggagatccgacaaa
gacattttcatgaacaacgcatatttcagacaatctggaaatccaaaattcatgtgttca
cactccagacaacagatgataaagcccaaacacggttcggccgtttcaaagcttaccaaa
tacgccggagcattggattgccgggtcggaaaaccatgctaa
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