Brassica oleracea (wild cabbage): 106332627
Help
Entry
106332627 CDS
T04124
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 37f-like
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
3.6.4.10
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03060
Protein export
boe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
106332627
04141 Protein processing in endoplasmic reticulum
106332627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
boe03110
]
106332627
04131 Membrane trafficking [BR:
boe04131
]
106332627
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106332627
Enzymes [BR:
boe01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
106332627
Chaperones and folding catalysts [BR:
boe03110
]
Heat shock proteins
HSP70 / DNAK
106332627
Membrane trafficking [BR:
boe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
106332627
Autophagy
ER-phagy
ER stress-related proteins
106332627
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106332627
Exosomal proteins of other body fluids (saliva and urine)
106332627
Exosomal proteins of colorectal cancer cells
106332627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Radial_spoke_3
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
106332627
NCBI-ProteinID:
XP_013626563
UniProt:
A0A0D3B5D7
LinkDB
All DBs
Position
C3:11749589..11752463
Genome browser
AA seq
669 aa
AA seq
DB search
MARSLGANGTVVLAIIFFGCLFAFSTAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEII
ANDQGNRITPSWVGFTDNERLIGEAAKNQAAVNPERTVFDVKRLIGRKFADKEVQKDRKL
VPYQIVDKDGKPYIQVKIKDGETKVFSPEEVSAMILTKMKETAEAYLGKKIKDAVVTVPA
YFNDAQRQATKDAGVIAGLNVARIINEPTAAGIAYGLDKKGGEKNILVFDLGGGTFDVSV
LTIDNGVFEVLSTNGDTHLGGEDFDHRIMDYFIKLIKKKHQKDISKDNKALGKLRRECER
AKRALSSQHQVRVEIESLFDGLDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKS
QIDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETK
DILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSL
TKDCRLLGNFDLTGIPPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNEKGR
LSQEEIDRMVKEAEEFAEEDKKVKERIDARNSLETYVYNMKNQVNDKDKLAEKLEADEKE
KIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQRSGGAPGGAGGESATE
EEDESHDEL
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctcactcggagcaaacggcaccgttgtgctcgcgatcatcttcttcggatgt
ttgtttgcgttttccactgctaaagaagaggctaccaagttgggaacagtgatagggatt
gatcttggtactacctactcttgtgttggtgtttacaagaatgggcacgttgagatcatt
gccaatgaccagggaaaccgtattacaccttcgtgggttggtttcactgacaatgagagg
ctcattggtgaggctgctaagaaccaggcggctgttaatcctgagaggactgtctttgat
gtcaagagattgatcgggcgaaaattcgcggacaaagaggttcagaaggataggaagctt
gttccttaccagattgtggacaaggatggcaagccatacattcaagtcaagatcaaggat
ggtgagaccaaggttttctctcctgaggaggtcagtgccatgattttgactaagatgaag
gagactgctgaagcttaccttggaaagaaaatcaaggacgctgttgtcactgttccagct
tacttcaacgatgcacagcggcaggctacaaaggacgctggtgttattgctggtctcaat
gttgccagaatcatcaacgaacccactgctgctggtattgcctacggtcttgacaagaag
ggtggtgagaagaacatccttgtctttgaccttggtggtggtacttttgatgtcagtgtc
ttgaccattgataacggagtgtttgaggttctctccacaaatggtgacactcacttggga
ggtgaggactttgaccacaggatcatggattactttatcaaattgatcaagaagaagcat
caaaaggacatcagcaaggacaacaaggctcttggtaagctccgcagggaatgtgagagg
gccaagagagctctcagtagccagcaccaagtccgtgtagagattgagtccctctttgat
ggtcttgatttctcggagcctctcaccagagctcgtttcgaggagcttaacaatgactta
ttcaggaagacaatgggaccagtgaagaaggccatggatgatgctggtctacagaagagt
cagatcgatgagattgttcttgttggtggaagcactaggatccccaaggttcagcagctg
ttgaaggacttcttcgaagggaaagagccaaacaagggtgtcaaccccgacgaagctgtt
gcctatggtgcggcggtccagggtggtatcctgagcggagaaggcggtgatgagaccaaa
gacatccttcttcttgacgttgcgccactcactttgggtattgagaccgtgggaggagtg
atgacaaaactgatcccgagaaacacagttatcccgaccaagaagtctcaggttttcacg
acgtaccaagaccagcagaccaccgtctccatccaggtctttgaaggtgagcgaagtctc
accaaggactgcaggctgctcgggaacttcgacctcaccggaatcccaccggctcctaga
ggaacacctcaaatcgaggtgacgtttgaagtagacgccaacggtatcctgaacgtgaaa
gcagaggacaaggcgagtggtaaatcagagaagatcacaatcacaaacgagaaggggcgt
ctgagccaggaagagatcgaccggatggtgaaggaggcagaggagtttgcggaggaagac
aagaaggtgaaggagagaatcgacgcgaggaacagccttgagacatacgtgtacaacatg
aagaaccaagtgaacgacaaggacaagcttgcagaaaaactggaagccgacgagaaggag
aagattgaagcagcgacgaaagaagcattggagtggcttgacgagaaccaaaactcggag
aaggaagagtatgacgagaagttgaaggaagtagaggcagtgtgtaacccaatcatcact
gctgtttaccagaggtcaggtggtgcaccaggcggtgcgggtggagaatcagcgaccgag
gaggaagatgagtctcatgatgagctctaa
DBGET
integrated database retrieval system
