Brassica oleracea (wild cabbage): 106332627
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Entry
106332627 CDS
T04124
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 37f-like
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
5.6.1.10
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03060
Protein export
boe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
106332627
04141 Protein processing in endoplasmic reticulum
106332627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
boe03110
]
106332627
04131 Membrane trafficking [BR:
boe04131
]
106332627
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106332627
Enzymes [BR:
boe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.10 non-chaperonin molecular chaperone ATPase
106332627
Chaperones and folding catalysts [BR:
boe03110
]
Heat shock proteins
HSP70 / DNAK
106332627
Membrane trafficking [BR:
boe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
106332627
Autophagy
ER-phagy
ER stress-related proteins
106332627
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106332627
Exosomal proteins of other body fluids (saliva and urine)
106332627
Exosomal proteins of colorectal cancer cells
106332627
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Radial_spoke_3
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
106332627
NCBI-ProteinID:
XP_013626563
UniProt:
A0A0D3B5D7
LinkDB
All DBs
Position
C3:11749589..11752463
Genome browser
AA seq
669 aa
AA seq
DB search
MARSLGANGTVVLAIIFFGCLFAFSTAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEII
ANDQGNRITPSWVGFTDNERLIGEAAKNQAAVNPERTVFDVKRLIGRKFADKEVQKDRKL
VPYQIVDKDGKPYIQVKIKDGETKVFSPEEVSAMILTKMKETAEAYLGKKIKDAVVTVPA
YFNDAQRQATKDAGVIAGLNVARIINEPTAAGIAYGLDKKGGEKNILVFDLGGGTFDVSV
LTIDNGVFEVLSTNGDTHLGGEDFDHRIMDYFIKLIKKKHQKDISKDNKALGKLRRECER
AKRALSSQHQVRVEIESLFDGLDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKS
QIDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETK
DILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSL
TKDCRLLGNFDLTGIPPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNEKGR
LSQEEIDRMVKEAEEFAEEDKKVKERIDARNSLETYVYNMKNQVNDKDKLAEKLEADEKE
KIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQRSGGAPGGAGGESATE
EEDESHDEL
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctcactcggagcaaacggcaccgttgtgctcgcgatcatcttcttcggatgt
ttgtttgcgttttccactgctaaagaagaggctaccaagttgggaacagtgatagggatt
gatcttggtactacctactcttgtgttggtgtttacaagaatgggcacgttgagatcatt
gccaatgaccagggaaaccgtattacaccttcgtgggttggtttcactgacaatgagagg
ctcattggtgaggctgctaagaaccaggcggctgttaatcctgagaggactgtctttgat
gtcaagagattgatcgggcgaaaattcgcggacaaagaggttcagaaggataggaagctt
gttccttaccagattgtggacaaggatggcaagccatacattcaagtcaagatcaaggat
ggtgagaccaaggttttctctcctgaggaggtcagtgccatgattttgactaagatgaag
gagactgctgaagcttaccttggaaagaaaatcaaggacgctgttgtcactgttccagct
tacttcaacgatgcacagcggcaggctacaaaggacgctggtgttattgctggtctcaat
gttgccagaatcatcaacgaacccactgctgctggtattgcctacggtcttgacaagaag
ggtggtgagaagaacatccttgtctttgaccttggtggtggtacttttgatgtcagtgtc
ttgaccattgataacggagtgtttgaggttctctccacaaatggtgacactcacttggga
ggtgaggactttgaccacaggatcatggattactttatcaaattgatcaagaagaagcat
caaaaggacatcagcaaggacaacaaggctcttggtaagctccgcagggaatgtgagagg
gccaagagagctctcagtagccagcaccaagtccgtgtagagattgagtccctctttgat
ggtcttgatttctcggagcctctcaccagagctcgtttcgaggagcttaacaatgactta
ttcaggaagacaatgggaccagtgaagaaggccatggatgatgctggtctacagaagagt
cagatcgatgagattgttcttgttggtggaagcactaggatccccaaggttcagcagctg
ttgaaggacttcttcgaagggaaagagccaaacaagggtgtcaaccccgacgaagctgtt
gcctatggtgcggcggtccagggtggtatcctgagcggagaaggcggtgatgagaccaaa
gacatccttcttcttgacgttgcgccactcactttgggtattgagaccgtgggaggagtg
atgacaaaactgatcccgagaaacacagttatcccgaccaagaagtctcaggttttcacg
acgtaccaagaccagcagaccaccgtctccatccaggtctttgaaggtgagcgaagtctc
accaaggactgcaggctgctcgggaacttcgacctcaccggaatcccaccggctcctaga
ggaacacctcaaatcgaggtgacgtttgaagtagacgccaacggtatcctgaacgtgaaa
gcagaggacaaggcgagtggtaaatcagagaagatcacaatcacaaacgagaaggggcgt
ctgagccaggaagagatcgaccggatggtgaaggaggcagaggagtttgcggaggaagac
aagaaggtgaaggagagaatcgacgcgaggaacagccttgagacatacgtgtacaacatg
aagaaccaagtgaacgacaaggacaagcttgcagaaaaactggaagccgacgagaaggag
aagattgaagcagcgacgaaagaagcattggagtggcttgacgagaaccaaaactcggag
aaggaagagtatgacgagaagttgaaggaagtagaggcagtgtgtaacccaatcatcact
gctgtttaccagaggtcaggtggtgcaccaggcggtgcgggtggagaatcagcgaccgag
gaggaagatgagtctcatgatgagctctaa
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