Brassica oleracea (wild cabbage): 106332756
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Entry
106332756 CDS
T04124
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 12
KO
K05391
cyclic nucleotide gated channel, plant
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106332756
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
boe04040
]
106332756
Ion channels [BR:
boe04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106332756
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GFIT
Motif
Pfam:
Ion_trans
Motif
Other DBs
NCBI-GeneID:
106332756
NCBI-ProteinID:
XP_013626707
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All DBs
Position
C3:20802657..20806412
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AA seq
441 aa
AA seq
DB search
MERILNKQAVINRVKSLQMNTLRGNWRKTILIVCVVALGIDPLYLFVPVVDSPKFCFTFD
KKLATGVSVLRTFIDVFYVVHIILNFMRYSNGELNLHAKPKRETYYFISYTIVDILSVLP
MPQVLVLTLMRRSDSLVSREILKWIVLSQYIPRILRIYPLYKEVTKASGTVAETKWIGAA
FNLFLYMLHSHVFGAFWYVSSVEKINKCWRLACPHLPGCSLKFQYCGREGGNNIPYGLNT
SCPLIEPDQITNSSVFNFGMYIDALKSGIVEVKPDDFPRKFFYCFWWGLRNISALGQNLR
TSNSVGDIVFALIICVSGLLLFAVLIGNIQKYLQSNTTRIDEMEERKRDTEIWMSSKSLP
ENLKDMIRRHEEEKWQKTRGIEEEAFLQSLPDHIRLHIERNSLNSRGNEEGGRRKQEVDG
RRGEEEDMTRNDEGETHQRMA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaattttaaataaacaggcagtaattaacagagtcaagagtctccagatgaac
actcttcgtggaaactggaggaagacaatcctgatcgtttgtgttgttgctttgggtatt
gatcctttgtatctctttgtccctgtggttgattctcctaagttctgcttcactttcgac
aagaagcttgccacaggagtgtctgtccttcgtaccttcattgacgtattctatgtggtt
catatcattttgaatttcatgagatattcaaatggcgagttaaacttacatgccaagcct
aaaagggaaacatattatttcatctcgtataccattgttgacattttgtctgttctcccc
atgcctcaggttctggttctcactttaatgcgtcggtctgactcgctcgtgtcaagagaa
atactgaaatggattgtactttctcaatatataccaagaattctacgtatctatccgctt
tacaaagaggtgacaaaagcctctggtacagtagcagaaacaaagtggattggagctgct
tttaaccttttcctctacatgttgcacagtcatgtgtttggggctttctggtacgtgagt
tcagtagaaaagattaacaaatgttggcgtctagcatgtcctcatctcccgggatgcagt
ctcaaatttcagtactgtggacgagaaggtggaaacaacattccctacggcctgaacact
tcatgccccttaatcgaacctgaccaaatcacaaactcctcagtcttcaactttggtatg
tacattgatgcattgaagtcagggatcgtagaggtcaagccagatgattttccgaggaag
ttcttttactgcttttggtggggtctacgaaatattagtgctttaggtcaaaacttacgg
acaagcaactctgttggggatatcgtctttgctctcatcatctgcgtctctggtttactt
ttgtttgctgtcctcattggaaacatccagaagtacctgcaatcaaatacaactagaata
gatgaaatggaggagagaaagagagacactgaaatttggatgtcgagtaagagtctgccg
gaaaatctaaaggacatgatcagaagacacgaagaagagaaatggcaaaaaacaagaggc
atcgaagaggaagcttttcttcaaagccttccagaccacatcaggctccacattgaacgg
aattctttaaacagtagggggaacgaggaaggaggaagaaggaaacaagaagtggatgga
agaagaggtgaagaagaagacatgacgagaaatgacgagggggagacgcaccagaggatg
gcgtga
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