Brassica oleracea (wild cabbage): 106332814
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Entry
106332814 CDS
T04124
Name
(RefSeq) nuclear pore complex protein NUP58-like
KO
K14307
nucleoporin p58/p45
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106332814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106332814
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106332814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Motif
Other DBs
NCBI-GeneID:
106332814
NCBI-ProteinID:
XP_013626760
UniProt:
A0A0D3BJX2
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All DBs
Position
C3:55026567..55028719
Genome browser
AA seq
460 aa
AA seq
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MSSFNPFSTPQRHQQTPQPQSISFFSPPQSTPFFSQLQQQQTPSFQPHQFQQQQQQQQQS
QQQLYLFTNDQAPASYSTEWSDLHPDSQKLLLEIEKKILEYTSESLRLDQCSRLYDSSIA
TEGFEFDASRIVQELGGINATMDRQKAVLHELMLVVKDMFRNSEVAVRSFMMLQPRFRRS
KPGGGRAVVVSGGDSQQPQPQGVNSAPASSGEQQAVQVSYFYRGIPKKPTAFLLQTVVRF
EKYLGECRQWVEELEQLLALDSDKYNRHVLVLESLPKVMSNVHAFFVHVAAKVENVHQYI
ESLRTAYLADQRRRGECNDPFLEADRRETAKQEAAAKRVHPTLHLPATSTTTTSAQTSTQ
VAGLITSSGVSNAPQTPAAFPTSGAGLFPDTPASVPSSSLFATPVRPVFGAPPASGSLFG
PPTPSNPATPSQFAGPSPGSGAKFSSLTRPSRFKSRTSRR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgttcaatccattctctaccccacagcgacatcagcagacgcctcagccgcag
agcatctccttcttctcgccaccgcagagcactcccttcttctctcaactgcaacaacag
caaacgccgtcgtttcagccgcaccagttccagcagcaacaacaacaacaacaacaaagt
cagcagcagctgtatttgttcacgaacgatcaagctccggcgagttacagcaccgaatgg
agtgatcttcatcccgattctcagaaacttctccttgagattgaaaagaagatattggag
tacactagtgaaagcctgaggctagatcaatgcagccgactttacgattcttctattgcc
actgaaggttttgagtttgatgcaagccgcattgttcaggagcttggtgggattaatgct
accatggacagacaaaaagctgttctccacgagcttatgctggttgttaaagatatgttt
cgtaattcagaggttgccgttaggtctttcatgatgctacagccaagattccgtcgttct
aaaccaggaggaggacgagctgttgttgttagtggtggtgattctcagcaaccacagccg
cagggagtgaactcagctccagcttcctctggtgaacagcaagcagttcaagtttcttac
ttttaccgtgggatcccaaagaaacccactgcttttctgcttcaaacagttgtgagattt
gagaagtatctaggcgagtgccggcaatgggttgaggagctggagcagttgctcgcgttg
gattctgacaagtataatcgacatgttttagttttggaatctcttccgaaagtcatgtct
aatgtgcatgccttctttgttcacgtggctgctaaggtagagaatgttcaccagtacatt
gaatcgttgaggacagcgtatcttgctgaccagcggcggagaggagaatgcaatgatccg
tttcttgaggctgatcggagggaaacagcaaaacaggaagctgctgctaaaagggtccac
ccaactcttcatctacctgctacttctactactactacaagtgcacaaacctcaacacaa
gttgctgggttgattactagctcaggggtatcgaatgctccacaaacacctgcagccttt
ccaacatcaggagctggcttgtttcctgacacacctgcgtcagtaccttcgtcttctctc
tttgctacaccagttagaccagttttcggtgctccaccagcttctggatctttgtttggc
ccgccaactccgtcaaatcctgctacgccttcacagtttgcaggtccttcacctggttca
ggagccaagttcagttctctgacaagaccttcaaggttcaaatcccgaacttcacgacgt
tag
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