KEGG   Brassica oleracea (wild cabbage): 106332972
Entry
106332972         CDS       T04124                                 
Name
(RefSeq) RING-H2 finger protein ATL32
  KO
K10664  E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:boe04121]
    106332972
Enzymes [BR:boe01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106332972
Ubiquitin system [BR:boe04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    106332972
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-ANAPC11 zf-C3HC4_3 zf-RING_16 zf-Nse Prok-RING_4 zf-RING_4 zf-RING_6 Baculo_RING RINGv zf-RING-like
Other DBs
NCBI-GeneID: 106332972
NCBI-ProteinID: XP_013626908
UniProt: A0A0D3BJN4
LinkDB
Position
C3:54243571..54244860
AA seq 310 aa
MARVQGFISHRWIIFQLIIVLHVANAQSLPPPSQDELQPGHAPSKTTVFAVLVTAFFFFG
LLSVYIRHCTRAMPGHSNTNSRRRAFDGCSRRGGLEDAVVESFPVFAYSSVKESKIGAGD
LECAICLNELEDRETVRLLPVCNHLFHVDCIDAWLYSHATCPVCRFNLTAKPVKTGAEDR
APVSDHVVIDIRGDSEADEEEEKSRHRRPSSEIVGKFPRSNSTGHSMGRLSDGTERFTLR
LPEDVRRRIMAAKGRRLKRTRSFDADLMDSGYVVGSGGKSDRVSWADRWGLFVSKSNSGS
VRSPNGDSLT
NT seq 933 nt   +upstreamnt  +downstreamnt
atggcgcgagtccaaggtttcatttctcaccgttggatcatctttcagttaatcatagtc
ctccacgtggctaatgcacaatcgctcccgccaccgagtcaggacgagttgcaaccgggt
cacgcaccgtctaagaccacagtcttcgccgttctcgtcaccgcgtttttcttcttcggg
ttactatccgtctacatccgccactgcacgagagctatgcccggacactccaacacaaac
tcccgccgccgtgctttcgacggatgttcacggcgaggcggacttgaagacgccgtggtt
gagagcttccccgtcttcgcttactcctccgttaaggagtcgaagatcggagccggtgat
ctcgaatgcgcgatttgccttaacgaactggaggatcgcgagacggttcggttgcttccg
gtttgtaaccatctcttccacgttgattgtatcgacgcttggctttactcccacgcgact
tgtccggtttgcagattcaatctaactgctaaaccggttaaaaccggagcggaagatcga
gctccggttagcgatcacgtcgtgattgatattaggggagattcggaggccgatgaggaa
gaagagaaaagccgccaccggcggccgagttctgagatcgtcggtaagtttccgcggtcg
aattccaccggtcactcgatggggcgactcagtgatggcaccgagaggtttactctgcgg
ttgccggaggacgtgaggaggcggataatggcggcgaaaggacgtaggctgaaacgaacg
agaagctttgatgctgatttgatggatagcgggtacgtagtcgggtcgggtggaaaatcg
gatcgggttagctgggcggatagatggggtttgtttgtttcaaagtcaaactcgggttcc
gttagatcacctaacggcgattcgttgacgtga

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