Brassica oleracea (wild cabbage): 106333008
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Entry
106333008 CDS
T04124
Name
(RefSeq) transcription factor GAMYB-like
KO
K09422
transcription factor MYB, plant
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
boe03000
]
106333008
Transcription factors [BR:
boe03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
106333008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_Rap1
HTH_CHD1_Hrp3
A_deaminase
Motif
Other DBs
NCBI-GeneID:
106333008
NCBI-ProteinID:
XP_013626947
UniProt:
A0A0D3B4J1
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Position
C3:complement(9828484..9830687)
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AA seq
444 aa
AA seq
DB search
MHGGGETTATATEARGLKKGPWTTKEDAILTEYVRKHGEGNWNAVQKNSGLLRCGKSCRL
RWANHLRPNLKKGSFSPDEEKIIIELHAKMGNKWARMASQLPGRTDNEIKNYWNTRMKRR
QRAGLPLYPHEIHHQGIDNDDEFEFNSFQFSNQDHSNHQNMIQYTNSSNIPSPSSSFSSS
SSQPQKNMCLDPLIYTNPGLDHIPATPMNTHMFSLYNNSLENENNQFGFSLPLSSSSPSN
EFCTINKKDIDAKSCSSLLMRDHEMRPSSFPLGLDNTVLELPSVQIPTHFRSYNTIIDNG
VHLYPPAGNSGLLDTVLEESRALSRGGIFKDVTVSSSSLCEDQDKRVEIDFENRLIDHLN
SSHQSSSETTPNLYKRYNEPTIVKTTMDDDDGILLSFINNFPSTTPLPDDWYRVTEIQTE
ALTSGILIGNHQGNSRLEPQKAPP
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcacggtggtggagagacgacggccacggcgactgaggcgagggggttgaagaaaggg
ccgtggacgacgaaggaggatgcgatcttgacggagtacgtgaggaaacacggcgaaggt
aactggaacgcggtgcagaagaactcaggcttgctccggtgtgggaaaagctgccgtcta
cggtgggctaaccatctccggccaaatctaaagaaaggatcatttagtcctgatgaagag
aagatcatcatcgagcttcacgctaagatgggaaacaaatgggctcgtatggcttctcag
ttacctggacgaaccgacaacgagattaaaaactattggaacacaaggatgaagagaaga
caacgagctggtttgcctttataccctcacgagattcatcatcaagggattgataatgat
gatgagtttgagtttaattcatttcagttctcaaaccaagaccattctaatcaccaaaac
atgattcaatacactaactcctcgaatattccatcaccctcctcttcattctcttcttca
tcttctcaacctcagaaaaatatgtgtttagatcccttaatatatactaatcccggccta
gaccacatccccgctactccgatgaatactcatatgttctctctttacaacaatagccta
gagaatgagaacaaccagtttggtttctctcttcctttgtcctcatcctcaccgtcgaat
gagttttgcactatcaataagaaagacattgatgctaagagttgtagttcattgcttatg
agagatcatgagatgagaccgagttctttccctttaggactagacaatactgtcttagag
cttccttcagtccaaataccgacccattttcgtagttataatactattattgacaatggt
gtccatctttatccacctgcgggcaacagtggattgcttgataccgtcttggaggagtct
cgagccttgtctcgcggtggaatcttcaaggacgttacggtttcttctagtagtctatgt
gaggatcaagacaagagagtggaaattgattttgagaatcggttgatagatcatctaaac
tcttctcatcaatcatcatcagaaacaacccctaatctttacaagaggtacaatgagcca
acgatagtgaagacaacaatggatgatgatgatggcatattgctgagctttatcaacaac
tttccttccaccacaccgttacctgatgactggtaccgggtgacagaaatccaaacagaa
gcattaacgagcggaatcttgataggaaaccatcaaggtaacagcagattggaaccacaa
aaggcaccaccttag
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