Brassica oleracea (wild cabbage): 106334018
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Entry
106334018 CDS
T04124
Name
(RefSeq) cell differentiation protein RCD1 homolog
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106334018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106334018
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106334018
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
106334018
NCBI-ProteinID:
XP_013627842
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Position
C3:9844499..9848562
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AA seq
306 aa
AA seq
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MVNLPDSLYEDYTISRVNLPSALASTVPPSPDIRMIIKWVDDLHNNIPSTFDFALQNLTI
HRKNFEILPRLLWKSHFTVAMLLQEILKIYPHTSRPVYSQNWMHLRVYNILLLFQCITHY
PETRNCFLKADMQYYFYTLMDINLTDTRLECLRLGALGVIAHMLSPPVDPAVVCYLVNTS
CLQHCTKAIDIGSTESKTIAVFIINKILSTGEGLQYCCVLPDRFFFIDGLLKRQLMYLTT
MARPCPSLFNLLVGCYTSLSYKPRARRGLRRYLPDMLFNNTFASLLAADPAAERNRRELI
KNLEMK
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatctaccagattccctatacgaagactacactatatccagggtgaatcttccc
tctgctttagcctccaccgtcccaccttcaccggacataagaatgattatcaagtgggtc
gatgatcttcataataatatcccatccaccttcgatttcgcgctgcagaatctcaccatt
cataggaaaaatttcgagatcttgcctcggcttttatggaaatctcattttacagtggcc
atgctgttgcaggagatcttgaaaatctacccacacacttcacgtccagtttactcacag
aactggatgcaccttcgagtgtacaacattttgcttttgttccagtgcataactcattac
ccggagacaagaaactgctttcttaaggctgatatgcaatactatttctatactttgatg
gacattaatctcaccgatacgcgtcttgaatgcctaaggcttggtgcattgggtgtcatt
gctcacatgttgagtccgcctgtagacccagctgttgtttgttaccttgtgaacacaagt
tgtttacaacattgcacaaaagccatcgacattggctcaacagaatcaaaaacaattgct
gtattcataattaacaagattctgtccactggtgaggggcttcagtactgctgtgtcttg
cctgatcgttttttcttcatagacggtctcctgaaaaggcagcttatgtatcttaccacc
atggccagaccttgtcccagcttgttcaatcttcttgttggttgctacaccagtctctcc
tacaagcccagggctcgaaggggactaaggcgttaccttcctgacatgctgttcaacaac
acctttgctagtttacttgctgcggacccagcagctgagaggaatcgtcgggagctgatt
aagaatctggaaatgaaatga
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