Brassica oleracea (wild cabbage): 106334217
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Entry
106334217 CDS
T04124
Name
(RefSeq) cell division control protein 48 homolog A
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106334217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106334217
03009 Ribosome biogenesis [BR:
boe03009
]
106334217
04131 Membrane trafficking [BR:
boe04131
]
106334217
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106334217
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
106334217
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
106334217
Membrane trafficking [BR:
boe04131
]
SNARE
SNARE associated proteins
Others
106334217
Autophagy
Aggrephagy
Other aggrephagy associated proteins
106334217
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106334217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_22
AAA_14
AAA_33
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
Mg_chelatase
AAA_28
ATPase_2
Parvo_NS1
AAA_18
Vps4_C
IstB_IS21
ABC_tran
Viral_helicase1
AAA_7
AAA_lid_PRS2_C
NB-ARC
TsaE
NACHT
DUF815
AAA_24
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
106334217
NCBI-ProteinID:
XP_013627986
UniProt:
A0A0D3BAC2
LinkDB
All DBs
Position
C3:complement(23704361..23707943)
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AA seq
809 aa
AA seq
DB search
MSNPAESSDSKSKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGDT
ILIKGKKRKDTVCIALADDSCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGNRVHI
LPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVV
APDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP
PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA
PSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPAL
RRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTE
AALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPSALRETVVEVPNVSWD
DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA
NFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGGGGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNI
FKACLRKSPVAKDVDINALAKYTQGFSGADITEICQRACKYAIRENIEKDIEREKRRSLN
PEAMEEDGVDEVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFET
NAGSGATTGVADPFATSAAASADDDDLYN
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaccccgctgaatcttccgactcgaaatcgaagaaagatttcagcactgctatt
ctcgagaggaagaagtctcctaatagacttgtcgtcgatgaggccatcaacgatgataac
tccgtcgtctctctccaccccgccaccatggagaagctccagctcttccgcggcgatacc
attctcatcaagggtaagaagaggaaggacactgtctgcattgctcttgctgatgactca
tgtgaggagccaaagattaggatgaacaaagtggttagatctaacttgagggttagactt
ggagatgtcatctctgttcaccagtgccctgatgttaagtacgggaatcgtgtgcacatc
ttgccagttgatgataccgttgaaggagtcactggaaacctctttgatgcttacctgaaa
ccttattttctggaagcataccgcccggtgaggaagggcgatctcttcctagtcagagga
ggaatgaggagtgtggagttcaaggttatagagacagatcctgctgagtactgtgtggtt
gctccggacactgagattttctgtgagggtgagccggtgaagagagaggatgaagaaagg
ctagatgaagtgggttatgatgatgttggtggtgtgaggaagcagatggctcagatcagg
gagcttgttgagcttcccttaaggcatccacagctcttcaagtcgattggtgttaagcca
ccgaaggggattctgctctacggaccgcccgggtccggaaagactttgattgctcgcgcc
gtggctaacgagactggcgcgtttttcttctgtatcaatgggcctgagatcatgtcgaag
ctggctggtgagagtgagagcaacctcaggaaagcgtttgaggaggcggagaagaacgct
ccttccatcatattcatcgatgagattgactctattgcaccgaaaagagagaagacgaat
ggggaggttgagaggaggattgtgtctcagctcctcacgctgatggatggtctgaagtca
cgtgctcatgttattgtcatgggagctaccaatcgccccaacagtatcgacccggctttg
agaaggtttggaagatttgatagggagattgatatcggtgttcctgatgaaattggacgt
cttgaagttcttaggatccacacaaagaacatgaagctcgctgaagatgtggatcttgag
aggatctcaaaggatacccacggttatgtaggtgctgatcttgcagctctctgcacagag
gctgccctgcaatgcatcagggagaagatggatgtgattgatttggaagatgactccatt
gatgctgagatcctcaattccatggcagtgactaatgaacacttccacaccgctcttggg
aacagcaacccatctgcacttcgtgaaactgttgtggaggttccaaatgtttcttgggat
gacattggaggtcttgagaatgtcaagagagagctccaggagactgttcaataccctgtg
gagcacccagagaagtttgagaaattcggcatgtctccttcaaagggagtcctattctac
ggccctcctggatgtggtaagacccttttggccaaagctatagccaacgagtgccaagcc
aacttcatcagtgtcaaaggtcctgagcttctcaccatgtggtttggtgagagcgaagcc
aatgtccgtgaaatcttcgacaaggctcgtcagtccgctccgtgtgttctcttctttgat
gagctcgactccattgcgactcagagaggaggtggaggcggaggtgatgctggcggtgcg
gctgatagagtcctcaatcagcttttgactgagatggatggaatgaacgccaaaaagact
gtcttcatcatcggagcgaccaacagacccgacattattgattctgctcttctccgtcca
ggaaggctcgaccagctcatttacattccactgccggacgaggactctcgcctcaatatc
ttcaaggcatgcttgaggaaatctcctgttgctaaagatgtggacatcaatgctctcgct
aagtacacgcaggggttcagtggtgctgatatcactgagatttgccagagggcttgcaaa
tacgccatcagagagaacattgagaaggacattgagagggagaagaggaggagcttgaac
ccagaggcgatggaggaagatggagtggatgaagtatcagagatcaaagctgcacacttt
gaggagtcgatgaagtatgcacgcaggagtgtgagtgatgcagacatcaggaagtaccaa
gcctttgctcagacgctgcagcagtctagagggtttggttctgagttcaggtttgagact
aatgctggttcaggggcaaccactggagtcgctgatccttttgccacctctgcagctgct
tctgcagatgatgatgatctctacaactag
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