Brassica oleracea (wild cabbage): 106334430
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Entry
106334430 CDS
T04124
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1-like
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
boe01001
]
106334430
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106334430
Enzymes [BR:
boe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
106334430
Protein kinases [BR:
boe01001
]
Serine/threonine kinases: Other
Other
106334430
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106334430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
LisH
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
WDR90_beta-prop_4th
EIF3I
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
106334430
NCBI-ProteinID:
XP_013628165
UniProt:
A0A0D3BM15
LinkDB
All DBs
Position
C3:complement(61190636..61197537)
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AA seq
1887 aa
AA seq
DB search
MDGQGNEPEVPNPTAENEQLALAAETETENSTGGGGGDNPKEDGLIEKAQKLMEHITAGA
NNPNPTVLHALSHLLESQESLFIKENGFYSNGRGSHISGKLCKLIKENDEFFELISSTFL
SENTYSTAVKAASARLLMNWLLTWTHPYVFDDAVTENFKKWVLEEAVKFPGEHSGSSEAS
DSEMLKTYSTGLLAHSLTSRGQLVEDVLTSGLSAKLMHYLRVRVIGEANTSRRDATEAKH
VSLKTKEDGRSRVRRVVDTVEGDHVLEADAGRETDVLSEGELEIDGRDRCNAPAVFDGKM
KPGEDNTGRDDPSRNRLNRSKSRARGKVNEGATNTDSLLASPTSGRLGVRDRDQSKNLDV
RNAEDGTIWLGKMKSGIMEIEREKNDECFQDCVIGTKNITDIVKRAVGAAETEARAAHAP
DEAVKAAGDAAAELVKTAALEEFKSSGSEEAAVAAARRAATTVIDAAEVSRNPTCVTSDQ
TAGTSSVETDAIVDVGEVSLPDIESLAQLQEKYCIQCLEILGEYVEVLGPVLHEKGVDVC
ITLLERTSQLGDSFTLSPLLPDVMKLICALAAHRKFAAMFVDRGGLQKLLAVPRVTETFY
GLSSCLYTIGSLQGIMERVCALPSDLIHQVVKLAIELLDCSQDQARKNSALFFAAAFVFR
AILDAFDAHNSLQKLLAILKDAASVRTGANSDRSPPEVMTSSEKQMAFHTCFALRQYFRA
HLLLLVESIRPSRSGRGGVPKVPNIRAAHKPLDISNEAVDAVFLQLQKDRKLGPTFVRTQ
WPAVNNFLASSGHVTMLELCQTPPVDRYLHDLLQYAFGVLHIVTSIPDGRKAIVTATLSN
NRAGIAVILDATNISNSIVDPEIIQPALNVLINLVCPPPSLSNKPLLAQNHQPVPDQATA
RPSTDVPADNAPPTPVAPASSGLVGDRRIFLGAGTGSAGLAAKLEQVYRQAREAVRGNDG
IKILLKLLQPRIYVNPPATPDCLRALACRVLLGLARDDTIAQILTKLEVGRSLSELIRDS
GGQSSGTDQVRWQAELTQVALELIGIVTNSGHANTLTASDAATPTLRRIERAAIAAATPI
TYDSKELLLLIHEHLQASGLGETASALLKEAQLNPLPSLAPPSSIAYSATQEISAPVAQV
QWPSGRASGGFFNSKPEVCAHDEDPNSRCNAALSAKKKQLASSTPETSTPVAQQQWPSGR
TNSGFFPSKPKVNAHEEDPSSRGNAAPSAKKKQLTFSPSFGSQSRKQYLSQDTQAQSTQR
INSNSNSDPACADTSEAAAEKNDLDADAQFKTPTFPRKRKLSELRETEMSTSSKRINLGE
LGPRTPACPTTASLRRNSTIAEASGFQTPASALDVNQSGSSRLGQMTPASQLRLPSDPQP
SERLSLDSLVVQYLKHQHRQCRAPITTLPPVSLLHPHVCPEPKRLLEAPLNITDRLGTRE
LQSYYSGVHGNRRDRQFVFSRFKSWRSYRDETALFTSISLLGGTNHLAVGSHAGEIKIFD
ASSGNMLESVSGHQAPVTLVQSYVSGDTQLLLSSSYSDVQLWDASNITVGSKHSFDGCKA
AKFSNSGSLIAALSSEGPTKDVLLYNVETGSLSEKFTDPDTSSRTSPYSLVHFNPCDSLI
LWNGHLWDRRIPNSCKRFDQFTDYGGGGFHPSRNEVIINSEVWDLRNMNRRLIRSVPSLD
QTAITFNSRGDVIYAMLRRNIEDVMSAVNTRRAKHPLFAAFRTLDAVNYSDIATIPVDRC
LLDFATEPTDSFLGLITMEDQDDMFSSARMYEIGRRRPTDDDSDPDDDGETEDEDEDDED
DEDDLDRILGLAGDDSGDDDMSSDDSEDNSASDFDDDDGGMFFDGGIMEIVSDGDDEDDN
GDSDGEDSADDGDSISSGEEDFLNSIH
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atggacggccaagggaacgaacccgaggtccctaatcccacggccgagaacgaacaatta
gctctcgcggcggagacggagacggagaattcaaccggcggaggaggaggagataaccct
aaagaagatgggcttatagagaaggcgcagaagctcatggaacatatcaccgccggggct
aataaccccaaccctactgtcctccacgctcttagccacctcctcgaatctcaggagtct
ttgtttataaaggagaatgggttctactctaatggtcgtggtagtcatatcagtggcaag
ctgtgtaaactcatcaaagagaatgatgagttctttgagttgatttcctcaacttttcta
tctgagaatacttactcaacagctgtgaaggcagcctccgcaaggttgctaatgaattgg
ttgcttacttggactcatccttatgttttcgatgatgctgttacggagaactttaaaaaa
tgggtcttggaagaggctgtcaagtttcctggtgaacactctggaagcagtgaggcctcg
gactctgagatgttgaagacttattctactggacttctcgctcactctctgacgagtcgt
ggtcaattagttgaagacgtcttgacatcaggactatctgctaagcttatgcattatctt
cgagtacgtgttatcggagaggcaaacacgagccgtagagatgcaactgaggctaagcat
gtgtccttaaaaacaaaagaagatggtcgaagtagggtgcggagggttgtggatacagtt
gaaggtgaccatgtgcttgaggcagacgccggtagagagactgatgtactgtctgaagga
gaactcgaaatcgatggtagagatagatgtaatgctccagctgtttttgacggtaaaatg
aagcctggagaagacaataccggaagagatgacccttcaagaaatagactgaaccgatca
aaatctagggcgagaggaaaggtgaacgaaggtgctactaatacagacagtctcttggca
tctcctacatcaggtcgtcttggtgtcagagatagggatcaatcaaaaaatttagatgtc
agaaatgcagaagatgggactatatggctggggaaaatgaagtctggtataatggagatt
gaaagagagaagaatgatgagtgctttcaagattgcgtgataggaaccaaaaacataact
gatatagtaaagagagcagttggagctgctgaaacggaagctagagctgcccatgctcct
gatgaagcagttaaagcagccggtgacgctgcagcagagcttgttaaaacagctgctttg
gaggaatttaagtcctctggcagtgaagaagctgccgtggctgctgctcgtcgagcagct
actacagtcatagatgccgctgaggtttcaagaaatcccacctgtgttacatctgatcag
actgcgggtacgagtagtgtggaaacagacgcaattgtggatgttggagaagtttcactt
ccagatattgaatcgttggctcagttacaggaaaagtattgcatccagtgcctagagata
ctgggagaatatgttgaggttctcgggcctgtcctccatgaaaaaggtgttgatgtatgc
attacgctactggagcgtacgtcccaacttggtgatagcttcacactgtcgcctttgtta
cctgatgtaatgaagttaatttgcgcgttggctgcacaccggaagtttgctgcaatgttt
gttgaccggggtggcttgcagaagttacttgctgtgccaagggttactgagaccttttat
ggtctctcatcttgcttatacaccataggctctcttcagggtattatggagcgtgtctgt
gcacttccatcggatctcatacatcaagtggttaaattagctatcgaacttctagactgt
tcccaggatcaagccagaaaaaattcagccttattctttgctgctgcttttgtctttaga
gccattttagatgcatttgatgctcataatagtttgcagaaactccttgcaattcttaaa
gatgcagcctcagttagaactggtgctaactctgaccgatcaccccctgaagtcatgacg
tcctcagagaaacagatggcttttcacacctgttttgctttgcgccaatattttagagct
catctgcttttgcttgtggaatccattcgtccaagcagaagtggccgaggtggtgtgcca
aaagttccgaatataagggcagcccataagccccttgacattagcaatgaagctgtggat
gccgtattccttcagttacagaaggataggaagttgggtccgacctttgtgagaactcag
tggcctgctgtcaataactttttggcctcctctggacatgttaccatgttggaactatgc
cagactccaccagtagaccgttatctccatgatctacttcagtatgcttttggtgttctt
cacatagttacatcaatacctgatggccgcaaagcaattgtgactgccacactcagcaac
aatcgtgctggcattgctgtcattctggatgcaactaatatttccaacagcatagtggac
cctgagatcatacagcctgcactaaatgtcctaatcaatctggtgtgcccaccaccatca
ttaagcaataagccgcttcttgcccaaaatcatcaacctgttcccgaccaagccactgcc
cgtccttcaaccgatgttcctgcagataatgctccgccaactcctgttgcaccagcgtct
tcaggtttggtcggggatcgaagaattttcttaggagcaggaaccggttctgctggcctt
gctgctaagttggagcaggtttatcgtcaagcacgggaggctgttcgtgggaatgatggt
ataaaaattctcttaaaacttcttcagcccagaatatatgtgaatccccctgctacccca
gattgtctacgagcgctggcctgcagggtacttcttggtctggctagagatgatacaatt
gcacaaatactgactaaacttgaggttggtaggagtttatcagaactaattcgggactca
ggtggtcagtcaagtggaacagatcaggtcaggtggcaggctgaacttacgcaggtggcc
cttgagctgatagggatagtgacaaattcagggcatgcgaatacactaacagccagtgat
gctgctactccaacactgaggcgcattgaaagagctgccattgccgcagcaacacctata
acatatgattctaaggagcttttgctccttatccatgagcacctccaggcatcaggactt
ggtgaaactgcttcagcactgttgaaagaggctcagttgaatcctcttccttccttggct
cccccttcttctattgcatattccgctacacaggagatatctgcaccggtagctcaggtg
cagtggccttctggtcgtgctagtggtggatttttcaacagcaaacctgaagtctgtgca
cacgacgaagatcctaactctagatgtaatgcggctctatctgccaagaaaaaacaactg
gcttcctccacaccggagacgtccacgccagtagcacagcaacaatggccctctggtcgt
actaacagtggttttttccccagcaaacccaaagtcaatgctcatgaagaagatcctagt
tcgagaggtaatgcagctccatccgcaaagaagaaacagttgactttctctcccagcttt
ggttcgcagtcacgaaagcaatatttgtcccaggacactcaagctcagtctacgcagaga
ataaacagtaattcaaattcagatcctgcttgtgcagatacatcagaagctgctgcagag
aagaacgaccttgatgccgatgctcaatttaagaccccaacttttccgagaaaacggaaa
ttgtctgagctaagagaaacagagatgtcaacctcaagtaaacgaatcaatttgggcgag
ctaggaccacgaactccagcttgtccaacaacggcttccttacgtaggaattcaaccatt
gcggaggcttcaggtttccaaacaccagcttcagctttagatgtcaaccaatctggaagc
tccagactaggccagatgacacctgcttctcagctaaggcttccaagcgatccccagccg
tcggaacggctatcactagactcccttgtagtccagtatttgaaacaccaacacaggcag
tgccgggctcctatcacaactctcccccctgtgtctctcctacatccgcatgtctgtcct
gagcctaaacggttacttgaagctccactaaacatcactgaccgtcttggcacccgtgag
cttcagagttattacagtggagtccatgggaatcgcagggaccgtcaattcgttttcagc
agattcaaatcctggagatcttaccgagatgagactgctctcttcacaagcatttcactt
cttggtggtactaatcatttagcagtcggtagccatgctggagaaatcaaaatatttgac
gctagcagcggtaacatgctagagagtgtctcaggtcaccaggctccggttacacttgtt
cagtcatatgtctctggtgatactcaactgttgctttcttcgagctacagtgatgtgcag
ttgtgggacgcgtctaatataactgttgggtctaaacactcgtttgatggatgcaaggct
gcaaagttcagcaactctgggtcacttattgcagcgctctctagtgaaggaccaacaaaa
gatgttcttctgtataacgtagagaccggcagtctttccgagaaattcactgacccagac
acttcttcccggactagtccctattctcttgtacacttcaacccatgcgattcactaata
ttgtggaatggtcatctctgggatcgccgtatcccaaatagttgcaaacggtttgatcag
tttactgattatggtggcggcggttttcatccttctcgaaatgaggtgatcataaactcg
gaggtctgggacttgaggaatatgaacaggaggcttattcggagtgtaccatcattggac
cagacagccattacgttcaactccaggggagatgttatatacgcaatgctgaggagaaac
attgaggacgtgatgtctgctgtcaacacacgccgtgcgaagcatccgttgtttgctgct
ttccgcactcttgatgcggtgaactattcagacattgccactataccggtggaccgatgt
cttcttgacttcgctacagaaccaacagattctttccttgggctgatcacaatggaagat
caagatgatatgttttcctcagccaggatgtatgagattggcagacggagaccaacggat
gatgactcggatcccgatgatgatggtgagacggaggatgaagatgaagatgatgaagac
gacgaagatgacctggaccggattcttggactagctggagacgacagtggagatgatgac
atgagcagcgatgacagtgaagataacagtgcgagtgattttgatgatgatgatggaggt
atgttctttgatggtgggattatggagattgtaagtgacggtgatgatgaagacgataat
ggtgatagtgatggtgaagacagtgctgatgatggtgattccattagcagtggcgaagag
gattttctcaacagcattcattaa
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integrated database retrieval system
