Brassica oleracea (wild cabbage): 106334452
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Entry
106334452 CDS
T04124
Name
(RefSeq) trafficking protein particle complex subunit 8-like
KO
K20305
trafficking protein particle complex subunit 8
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106334452
Membrane trafficking [BR:
boe04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
106334452
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_C
TRAPPC9-Trs120
Ig_TPPC8_3rd
Motif
Other DBs
NCBI-GeneID:
106334452
NCBI-ProteinID:
XP_013628189
UniProt:
A0A0D3B1G1
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Position
C3:complement(3915237..3923325)
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AA seq
1273 aa
AA seq
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MVEPVNSSLEKMLLEEISPVVMVLCTPLVEETFLKSGLSFVETLKPFCNFSNIDVPVRTS
GDQLYRLKKFTLRLFNASDIKQPNVEVAKQRLEHVITEAGEKVFDDLKSDPPQITDILSN
PESEIAPTWFQYYNKELIRTLSFSDHEAFDHPVACLLVVSSKDEQPVNKFVDLFNTNRLP
SLLNDGVMDPKILKHYLLVHDNQDATTERTSKVLSEMRSTFGNNECNLLCTNSSKEGNVE
HQANPWASFKSSVSADKLGCALTGDDIVEINDLMQEFASRHIIPHMEQKVRDLNQQISAT
RKGLRNQIKNLWWRKGKDDVPDSTKGSMYTFSSTESQIRILGDYAFMLHDYELALSSYRL
ISTDYKLDKAWKHYAGVQEMMGLAYFISDQSKKEAEYCMENAFSTYLKLGRSGFQNATRC
GLWWAEMLKAGDQYKEAASAYFRICGEEPLHAAVMLEQASYCFVLTKPAMLNKYGFHLVL
SGDHYKNCDQVSHAIRTYRSAISVYESTTWSHIKDHVHFHIGRWYALVGMHDVAVRNMLK
VLDCGNQSKATQEIFLRDFFEIVKKTGMKHEVVGLQLPFINMSSLQVIYEDHRTYASQAS
VLVQESIWQSLEDDIIPSLNSGKSNWLELQSKLLPKKYKESNVCVAGESVKVDLEFRNPL
LISTSITSVSLICELTSNSDDLKVDKDPSSISLGTESSAEHNQGSTSGFSSFTLSEMDLT
LGGGEKKLVRLTVTPSEEGILKIVGVRWRLSGSVVGVHYFQSAPGKAKTNKGRRKNKLTP
TDALKFLVIKSLPRLLGSIDHLPEKLYAGDLRYLVLELKNKSEFPIKNLKMKISNPRFVN
PGNHEEEVTTEFPDCLKKGHEQNFVQSETSSVFSFPKDVSLQGDKSLRWPLWLRAAIPGT
ISLYFTIYYEMENVTSIMKYRTLRMHYNLQVLPSLETSFEITPSPSRLQEFLVRMDILNR
ANSDSFQIHQLSTVGCRWGISLLERVDTILPSKSLLPGQALSCHFMIKDNRRSGTEEEKT
MSIPPSQTDVKLFAQDDDEKHFDIVNSPLASFHESERSCCQETSDQLSTNTVDFILISHP
AKSSNSSGVADIPKILSHHSCHNRIRSSNPLSWSLDGPQTIYHDFSTSLCEIQLKLVIRN
TSDGTSSVSFNTIDSVQDAAAPTPSAGNQSGWRYVPDVTEEMKLTSDVMGSRSGKPPSSM
ESSPPFTWSGLSSTKVEIQPLSTTEIPLQISVFAPGIYNLSSYKLTWERSGREDASSGTC
QGYPYYLIVLQSE
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccggtgaactcatcgcttgagaaaatgctcttggaagagatcagtccagtt
gtcatggtactctgcacgcctctcgttgaagagacttttctcaagagtggattatccttt
gtggaaacgctcaagccattctgcaactttagcaatatcgatgttcctgttcggacctca
ggcgatcagctttatcggctgaagaagtttacgctgagattgtttaatgcatcagatatc
aaacaaccaaacgtagaggttgcaaagcaacggctagagcatgttatcactgaagctggg
gagaaagtttttgacgatttgaaatctgaccctcctcagattactgatatactctctaat
ccagagtctgaaattgcacccacatggtttcagtattacaataaggaacttatccgtaca
ctctcgttttcagaccatgaagcttttgatcatcctgtggcttgtctcttggtcgtttca
tcaaaagacgaacaacctgtaaataaatttgtagatcttttcaacaccaatagattacct
tctttgcttaatgatggtgtaatggacccaaagattttgaagcattacctgttggtgcat
gacaatcaggatgccacaacagagagaacgtctaaagttctgtctgagatgagaagtaca
tttgggaacaatgagtgcaacttactttgcactaattcatctaaagaggggaacgtggaa
catcaggctaatccctgggcttcatttaaatcgagtgtttcggccgacaaacttggatgt
gctctcactggcgacgatattgtggagatcaacgatctgatgcaagagtttgcttcgagg
catataatccctcacatggagcagaaagttcgagatcttaatcaacagatttctgcaaca
aggaaaggacttagaaaccaaattaaaaacttatggtggagaaaaggaaaagacgatgtt
ccggattcaaccaaaggttctatgtatacatttagctccactgaatctcaaattagaatt
ttgggtgactacgccttcatgttgcatgattatgaacttgcattgtcaagctatcgctta
atatcaaccgattacaagctcgataaagcttggaagcactatgctggtgttcaggaaatg
atgggacttgcatatttcatctcagaccagtcaaaaaaggaagctgagtactgcatggaa
aatgcattcagcacttatctgaagcttgggaggtctggctttcaaaatgctacgagatgt
gggctctggtgggcagagatgctaaaagctggagaccagtacaaagaagctgcttctgct
tacttccgcatatgtggagaggaaccattacacgccgcagtcatgttagagcaagcttct
tactgcttcgtgttaactaagcccgcgatgttaaacaagtatggatttcatctagttctc
tcaggagaccactataaaaactgtgatcaggttagccatgcaattcgtacatatagaagt
gcaatctctgtttatgaatcaactacatggagccatatcaaagaccatgtacattttcat
attggacggtggtacgcacttgttgggatgcatgatgttgcagttagaaatatgctcaaa
gtactggactgtggcaaccaatccaaggcaacccaagagatttttctcagagactttttc
gagattgttaagaaaactggaatgaagcacgaggtggtgggacttcaactaccatttatt
aatatgtcgtctcttcaagttatatatgaagaccatcgcacttatgcatctcaagcttct
gttcttgtacaagagagcatctggcagtcactggaggatgatatcattccatcattaaat
tctggcaagtcaaactggctggaattacagtcaaagctactaccaaagaaatacaaggaa
tccaatgtttgtgtggctggagagtcggtgaaagtggatctggagtttaggaatcccttg
ctaatctctacttctataacaagcgtatctctcatctgtgaacttacctcaaattctgat
gacctaaaagttgataaagacccaagtagcataagcttggggaccgagagttccgcagaa
cataatcagggttcaacatctggtttctcttcattcactttgtctgaaatggacttaaca
ttaggcggaggcgagaaaaaactggtgagactcacggttacccccagtgaagaaggtatc
ctcaaaattgtcggtgtaaggtggaggttgtctggttctgttgtaggtgtgcattacttc
caatctgcccctggaaaggcaaaaactaacaagggaagacggaaaaacaaacttactccc
actgatgccttgaaatttttggtcatcaagagtctacccaggcttttgggttcaattgat
catctgcctgagaaattgtatgctggagatctacgttatcttgttttagagctaaaaaat
aagtcggaattcccgataaagaatcttaaaatgaagattagcaatccaagatttgtaaat
cctggaaatcatgaagaagaggtgacaacggagtttccagattgcttaaagaagggccat
gaacaaaattttgtccagagtgaaacaagtagtgtattttcatttccaaaggatgtgtca
ctgcaaggagataaatctttgaggtggcctctctggcttcgagctgccatcccaggaacg
atatctttgtatttcacaatatactatgagatggaaaatgtaacaagcatcatgaaatat
cgcaccctaaggatgcattataatttacaggttttaccatctctagagacctcgttcgaa
attacaccctctccgtcaagattgcaagagtttcttgtgcgtatggatatactgaaccgt
gcgaattcagattctttccaaattcatcagttgtcaacagttgggtgtcggtggggtatc
tccttacttgagcgtgttgatacaatcttaccttccaagtctctgcttcctgggcaagct
ttatcatgtcacttcatgattaaggataacagaagatcagggactgaagaagagaaaacc
atgtccattcctcccagccaaaccgacgtaaaactgtttgctcaggatgacgatgaaaaa
cattttgatatcgttaactcacctttagcaagcttccatgaaagtgaaaggtcatgttgt
caagaaacctcagatcagttaagtaccaataccgttgacttcattctaatctctcaccca
gcaaaatccagcaattcatctggagtggcagatataccaaagattctgtctcaccattca
tgtcataatagaatcaggagctcaaacccgctatcgtggtccctagacggtccccaaacc
atataccacgacttctcgacctccttgtgtgaaattcaactaaaattagtaatcagaaac
acatctgatggaacatcatctgtgagcttcaacaccattgattccgtacaagacgcagca
gcaccaactccttccgctggaaaccaatccgggtggcgctatgtgcctgatgtaacagag
gaaatgaaactgacttcagatgtcatggggagccgttcagggaagcctccatcttccatg
gaaagctcacctcctttcacatggtcaggtttaagttccacaaaggtcgaaatccagcca
ttgtcaacaacggagatcccgctgcagatatcggttttcgctccaggtatctacaatctc
tcttcgtataaacttacctgggagcgctccgggcgtgaagatgcatcatcagggacatgc
caaggctatccttattaccttattgttcttcagtctgagtga
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