Brassica oleracea (wild cabbage): 106334519
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Entry
106334519 CDS
T04124
Name
(RefSeq) coatomer subunit alpha-2 isoform X1
KO
K05236
coatomer subunit alpha
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106334519
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106334519
Membrane trafficking [BR:
boe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
106334519
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106334519
Exosomal proteins of bladder cancer cells
106334519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
TPR_COPA_B
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Fis1_TPR_C
ENTH
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
106334519
NCBI-ProteinID:
XP_013628262
LinkDB
All DBs
Position
C3:53819269..53824274
Genome browser
AA seq
1222 aa
AA seq
DB search
MLTKFETKSNRVKGLTFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH
NSQPLFVSGGDDYKIKVWNHKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGSLKKKSVSPADDLMR
FTQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWE
VDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHP
EINLLAAGHDNGMIVFKLERERPAFAVSGDSLFYVKDRFLRYYECSTQKESQVIPIRRPG
TPSLNQSPRTLSYSPTENAVLICSDLDGGSYELYIIPKESVGRSDVVQDAKRGTGGSAVF
IARNRFAVLEKSTSQVLVKNLKNEVVKKSALPIPTDAIFYAGTGNLLCRSEDKVVIFDLQ
QRLVLGELQTPFVRYVVWSNDMQSVALLSKHTIIIASKKLVLQCTLHETIRVKSGAWDEN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAITINATEYI
FKLALLRKKYDHVMGMIKNSQLCGQAMIAYLQQKGFPEVALHFVEDERVRFNLALESGNI
SVAVASATEINEKEQWYKLGVEALRQGNAGIVEFAYQQTKNFERLSFLYLITGKLDKLSK
LMKIAEVKNNVMGQFHNALYLGDVKERVKILENAGHLPLAYITASVHGLNDIAERLATEL
GDNVPSLPEGKTPSLLMPPSPVMCGGDWPLLRVMKGIFEGGLESAARGGAVDDEEEDIGG
DWGEGLDMVDVDGMEDTDIKAILEEAERGGEEEDNDEEGGWLGIDDLELPPELDTPKASA
NARSSVFVAPTQGMPVSHIWSQKSSLAAEQAAAGSFDAAMRLLHRQLGIKNFAPLKSMFI
DLFNGSHSYLRAFTSSPVVSLAIERGWSESSSPNVRGPPALVYDFSQQEEKLKAGYKATT
SGKLTEALRLFLSILHTIPLVVVESRSEVDEVKELVTIVKEYVLGLKMELKRRETRDDPV
RQQELAAYFTHCNLQLPHLRLALFSAMGVCYKARNLATAYNFAKRLLETNPMESQAKTAR
QIVQAAERNMTDATELNYDFRNPFVICGLTYVPIYRGQKDVSCPYCTARFVPNQEGNICG
VCDLAVIGADASGLVCSPSQVR
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaagttcgagacgaagagtaacagagtcaagggcctcaccttccaccccaaa
cgcccatggatcctcgccagtttgcacagtggcgtgatccagctctgggattatcgtatg
ggcactttgatcgatcgattcgacgagcacgaaggtcctgtccgtggtgtccattttcac
aattctcagcctctcttcgtctccggaggagacgattacaagattaaagtttggaaccac
aaaacgcacaggtgccttttcactctcctcggccatctcgactacatccgcactgtccag
tttcaccacgagaacccgtggattgtgagtgctagtgacgatcagactatccgcatatgg
aactggcagtcacggacttgtatctctgtgttgaccggtcataatcactatgttatgtgt
gcttctttccatcctaaggaagaccttgtcgtgtcagcatctttggatcagactgtccgt
gtctgggatattggttctcttaagaagaagtctgtgtctcctgccgatgacctcatgcgg
tttactcagatgaactctgatctttttggtggtgttgacgctatagttaagtacgtcctc
gaaggtcatgatagaggagtaaactgggcttcgtttcatcccacccttcctctcatcgtc
tctggtgcagatgaccgccaagtaaagctctggcgtatgaatgaaactaaagcatgggag
gtggatacactgcgaggccacatgaataatgtttcatctgttatgttccatgcaaaacag
gacattattgtatccaactctgaggataaaagcattcgtgtctgggatgctaccaagcga
actggaatccaaacttttcgccgtgagcatgatcgattctggattcttgcagttcaccct
gagattaatttactggcagcggggcatgacaatggtatgatcgtgttcaaacttgagaga
gaacgtcctgcatttgctgtgagtggtgattctttgttctatgtcaaagatagatttttg
aggtactacgaatgttcaactcagaaagaatcccaagttatccccatacggcgtcctggt
acaccaagcttgaatcaaagtcccagaactctatcttacagtccgacggaaaatgcagtt
ttgatctgctcagatctggatggtggctcttacgagttgtacatcatacccaaagaaagt
gttggcaggagtgacgttgtgcaagatgcaaagaggggcacaggtggttctgcggtattc
attgcccgtaaccggtttgctgttcttgagaaaagcaccagccaggtgctagtcaagaat
ctcaagaatgaggtggttaaaaagagtgctctgcctattcccacagatgctatcttttat
gctgggactggaaatttgctttgtagatctgaggataaagtggttatatttgaccttcag
caaaggctggtccttggtgaacttcagacaccgtttgttaggtacgttgtttggtctaat
gatatgcagagtgttgctttgctcagcaaacatactatcattatcgcgagcaaaaaactt
gtcctccagtgcacgcttcatgagacaatacgtgtgaaaagtggagcttgggatgaaaat
ggtgtcttcatttacacaactttgaaccatatcaagtactgccttcctaatggagatagt
ggaatcatccgaaccctggatgtccctatctatatcaccaaggtttctggaaatacaatc
ttttgcttggacagggatgggaaaaacagggcaatcaccatcaatgcaactgaatacatt
ttcaagcttgcactgctgaggaagaagtacgaccatgtcatgggcatgataaagaactct
cagctatgtggacaggctatgattgcttacctgcagcagaaaggattccctgaagttgcc
ctccattttgttgaggacgaaagggtccgattcaacctggctcttgaaagcggcaacatc
agcgtcgctgttgcgtccgctacagagattaatgagaaagagcagtggtacaaacttggg
gtggaggctcttcgccaaggtaatgctgggattgttgaatttgcgtaccagcagacgaag
aattttgagaggttgtcgtttctttatctcattactggtaagttggacaagctttcaaag
ctgatgaagattgcagaagtgaagaacaacgtaatgggtcagtttcataatgctctctac
ttaggagatgtaaaagagcgtgtcaagatacttgagaatgctggtcatttgcctctcgct
tatatcactgcttcggttcatggattaaatgacatcgctgagcgactggcgactgagctt
ggagataacgtgccctcattgcctgaaggaaaaactccatcgcttctgatgccaccatct
cccgtcatgtgtggtggtgattggcctcttctaagagtgatgaagggaatatttgaaggc
ggacttgagagtgcagccagaggaggggctgttgatgatgaagaagaagatattggtggc
gattggggtgagggacttgacatggtcgatgttgatggaatggaggacacagacatcaaa
gccattttggaggaagcagaaagaggaggagaagaggaagacaatgatgaagaaggtgga
tggttgggaattgacgacttggagctcccaccagagcttgacactcctaaggcctctgct
aacgcacgttcatccgtcttcgtggcacctactcaaggtatgcctgtaagtcatatttgg
agccagaaatcttcccttgctgctgagcaagccgcagcgggaagcttcgacgctgcgatg
cgtctgctccacagacagcttggcattaagaacttcgcgcctttgaaatcgatgtttatt
gatttgttcaacggaagccacagctatctgcgtgcttttacttcatctcctgtggtctca
cttgccattgagcgcggatggagcgagtcttccagtcccaacgtccgtggcccaccagct
cttgtttatgatttctcccagcaagaagagaagctcaaagctggctacaaagccacaaca
agtgggaaattgactgaggctctccgtctcttcctctctatcctccacaccatccctcta
gtggtggtcgagtcaagaagtgaagtcgatgaggttaaggagctcgtcaccatcgtcaaa
gaatatgtcctcggtcttaaaatggagcttaagagaagagagaccagagatgatccagtg
aggcagcaagagctcgctgcttacttcactcactgcaaccttcaactacctcacttaaga
ctcgccctgtttagtgcaatgggagtctgctacaaggcgaggaacctcgccactgcctat
aacttcgccaaaagattgttggaaacgaacccaatggagagccaggccaagacggctaga
caaattgttcaagcagctgaacgcaatatgactgatgctacagagctcaactacgacttc
agaaacccgtttgtgatatgcggattaacctatgtcccaatctatagaggtcagaaagac
gtgtcatgtccatactgcacggccaggtttgtaccaaaccaggaaggaaacatatgcggg
gtctgtgatcttgcagtcattggcgcagacgcatctggtttggtatgctctccgtctcag
gtccgctga
DBGET
integrated database retrieval system
