KEGG   Brassica oleracea (wild cabbage): 106334522
Entry
106334522         CDS       T04124                                 
Name
(RefSeq) clathrin heavy chain 1-like
  KO
K04646  clathrin heavy chain
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe04142  Lysosome
boe04144  Endocytosis
boe05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:boe00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    106334522
   04142 Lysosome
    106334522
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    106334522
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:boe04131]
    106334522
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:boe04147]
    106334522
Membrane trafficking [BR:boe04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    106334522
Exosome [BR:boe04147]
 Exosomal proteins
  Proteins found in most exosomes
   106334522
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B
Other DBs
NCBI-GeneID: 106334522
NCBI-ProteinID: XP_013628267
UniProt: A0A0D3BAN9
LinkDB
Position
C3:complement(24350438..24359358)
AA seq 1707 aa
MAAANAPITMKEVLTLPSVGINQQFITFTNVTMESEKYICVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVPGTTQDHLQIFNIEAKAKLKSHQMPEQVAFWKWI
TPKMLGLVTQTSVYHWSIEGDSEPVKMFDRTANLANNQIINYKCSPNEKWLVLIGIAPGS
PERPQLVKGNMQLFSVDQQRSQALEAHAASYAQFKVPGNENPSILISFASKSFNAGQITS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQVSHKFNLIYVITKLGLLFVYDL
ETASAIYRNRISPDPIFLTSEASSVGGFYAINRRGQVLLATVNEATIIPFISGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNSYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYMFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRVAQLCEKAGLYIQSLKHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSSEWAMECMKDLLLVNLRGNLQIIVQACKEYCEQLGVDSCIKLFEQFK
SYEGLYFFLGSYLSMSEDPEIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSKVVGKYCEKRDPTLAVVAYRRGQCDEELINVTNKNSLFKLQARY
VVERMDGDLWDKVLVEENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVDAQLYE
EAFAIFKKFNLNVQAVNVLLDHVGSIERAVEFAFRVEEDSVWTQVAKAQLRDGLVSDAIE
SFIRADDASHFLEVIRACEDTNVYDDLVRYLLMVRQKVKEPKVDSELIYAYAKIERLGEI
EEFILMPNVANLPNVGDRLYDEALYEAAKIIYAFTSNWAKLAVTLVKLQQFQSAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNVIIQVDDLEEVSEYYQNRGCFSELISLMESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWQELTYLYI
QYDEFDNAATTVMNHSPEAWEHMQFKDIVAKVANVELYYKAVHFYLQEHPDIINDLLNVL
ALRLDHTRVVDIMRKAGQLRLIKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESTDL
HDSFDQIGLAQKIEKHELVEMRRVAAYIYKKAGRWKQSIALSKKDNMYKDCMETASQSGD
HDLAEQLLVYFIEQGKKECFATCLFVCYDLIRPDVALELAWTNNMIDFAFPYLLQFIREY
SGKVDELIKDKLEAQKEVKAKEQEEKDVMSQQNMYAQLLPLALPAPPMPGMGGGPGMGGG
YGPPPPMGGMPGMSPMPPYGMPPMGGY
NT seq 5124 nt   +upstreamnt  +downstreamnt
atggcggcagcaaacgccccaatcacgatgaaggaggtcctaacgctaccgagcgttggg
atcaatcaacagttcatcacgtttacaaatgtcactatggagtctgagaagtacatatgt
gtacgagagactgcaccgcagaacagcgttgttattattgatatgaatatgccgatgcag
cctctaaggagacctatcactgcagactctgctctcatgaacccgaactctaggatcctt
gccttgaaagctcaagttccaggaactactcaggatcatctgcagatatttaatatcgaa
gcaaaagcaaagttgaaatcacatcagatgcctgagcaggttgctttttggaaatggatt
acaccaaagatgttggggctggtcacacaaacttctgtgtatcattggtcgattgaaggt
gattccgagccagttaagatgtttgatagaacggccaatttggcaaacaatcaaattatt
aactataagtgctctcctaatgagaagtggttggtgttgattggaattgctcctggctct
cctgagaggccacaattggtaaaagggaatatgcagcttttctctgtggatcaacagcgg
agccaggctcttgaagcacatgctgcttcatatgcccagtttaaggtccctgggaatgag
aatccttcaatactcatatcctttgcaagcaagagctttaatgctggacagataacatca
aaattgcatgtcattgagcttggtgcccaaccaggaaaaccatcgtttacaaagaagcag
gcagatctctttttcccccctgattttgcggatgattttcctgtagccatgcaggtctct
cacaagtttaacttgatatatgtcatcaccaagcttggcctgttatttgtatacgattta
gaaacggcttctgcaatctacagaaatcgtataagtccagaccctattttcttaacttct
gaagcttcctcagttgggggtttctatgccattaataggcgaggacaagttcttttggct
acagttaacgaggctacgataataccttttattagcggtcaattgaacaatttagaactt
gctgtcaatcttgcgaaaagaggaaacctccctggtgcagaaaacctggttgtccaacgg
ttccaggagttatttgctcaaacaaagtataaggaggctgctgagcttgctgctgaatct
cctcaggggattctacggacacctgatacggtggctaaattccagagtgttcctgtacaa
gcagggcaaactcctccattgttacagtattttgggacccttttgactagagggaagctc
aattcatatgagtctttggaactatctcgtcttgttgtgaatcaaaacaagaagaacctc
ttggaaaactggttggcagaggataagttagaatgcagtgaagaacttggagaccttgtc
aagactgtggataatgaccttgctctgaaaatatatatcaaagctcgagctactccaaaa
gttgttgcagcttttgcagagcgaagggagtttgacaaaatattaatttactcaaagcag
gttgggtacacacctgattacatgtttcttctgcaaaccatactccgtacggatcctcag
ggagcagtaaattttgctttaatgatgtcccaaatggaaggaggttgtccagttgactac
aacaccatcactgatcttttccttcagagaaatctgatacgtgaagcgactgctttcctt
ctcgatgttctgaagccaaatttacctgagcatgcttttctgcaaactaaggtgctggag
atcaatttggtaacctttcctaatgtggctgatgcaattttagcaaatgggatgttcagc
cactatgaccgtcctcgtgttgctcagctttgtgaaaaggctggactttatatccaatct
ttaaagcactactcagagttacctgatataaaacgtgtaattgtgaacactcatgctatt
gagccacaggctcttgttgagtttttcggtaccctttccagcgaatgggctatggagtgc
atgaaggatcttctgctggtcaacctgagaggcaaccttcagataatcgttcaggcttgc
aaggagtactgcgagcaacttggtgttgattcatgcattaaactctttgagcagttcaag
tcgtacgaagggctatactttttccttggttcatatttgagtatgagtgaggatcctgag
attcacttcaagtacattgaagcagctgccaagactggtcaaataaaggaggttgagcgt
gttactagagagtctaacttttatgatgctgaaaagacgaagaactttttgatggaagcc
aagcttccggatgccagacctctgataaatgtctgcgaccgtttcggctttgtccctgat
cttactcattacttgtacacaaacaacatgcttcgttacattgaaggttacgttcaaaag
gtgaatcctgggaatgctcccctagttgtgggacagttgcttgatgacgaatgccctgaa
gattttataaaaggcctcattctctctgttcgttcattgcttcctgttgaaccccttgtt
gacgaatgtgagaagagaaatcgactccgtctcctcactcagttcttggagcatctagtt
agtgagggaagccaagatgtgcatgtccataatgctttgggtaaaattatcatagacagt
aacaacaaccctgaacatttcctgaccaccaacccttactacgactctaaggttgtgggt
aagtactgtgagaaacgtgatcccaccctggctgttgtggcatacagaaggggacaatgt
gatgaggaactcatcaatgtcaccaacaagaactctttgttcaagttacaagccaggtat
gtagtggagaggatggatggtgacctttgggataaggttcttgtggaagaaaacgaatat
agaagacaacttattgaccaagttgtgtctactgctttacccgaaagcaagagcccggag
caagtttctgcagctgttaaagcattcatgactgctgatctgccgcatgagcttatcgag
cttctggaaaagattgtgcttcaaaattctgccttcagtggaaacttcaatctgcaaaat
ctgttaatattgacagctatcaaggccgatccgtctagagttatggattacatcaacagg
ctagataattttgatggtccggctgttggagaagtggcggttgatgcccaattgtatgag
gaagcatttgccattttcaagaagtttaacctaaatgtccaggctgtcaacgtattgttg
gatcacgtcggaagcattgagcgtgccgttgagtttgcattccgggtcgaagaagattct
gtttggacccaagtcgccaaggctcaactcagggatggactagtcagtgatgcaattgag
tcctttatccgagctgatgatgcctctcatttcctggaggttatccgcgcctgtgaagat
actaatgtttatgatgacttggtcagataccttcttatggttagacagaaggtgaaggaa
cccaaggttgatagtgagctcatctatgcttatgcaaagattgaaagattgggtgagatt
gaagaatttattctgatgccaaacgttgctaacctaccaaatgtgggcgatcgcctgtat
gacgaagcactgtacgaggctgcaaaaataatttatgcgttcacatcgaactgggccaag
ttagccgtcacacttgtgaagttgcagcagttccaaagtgccgttgatgctgcaaggaaa
gcaaacagtgcaaagacatggaaggaagtttgcttcgcttgtgttgatgctgaagaattc
cgcctggctcaaatatgtggacttaacgttatcatacaggtggacgacctggaagaagtc
agcgagtactaccagaacagaggatgcttcagtgaattaatctcactgatggagagtgga
cttggtctggaacgggctcacatggggatcttcaccgagttgggtgtactgtacgccaga
tatcgctacgagaagcttatggaacacatcaagttgttctcgactcgcctcaatattccc
aagcttatacgggcctgtgatgagcaacagcattggcaagaacttacctatctgtacatt
cagtatgatgagtttgataacgctgcaaccactgtgatgaaccattctcctgaagcatgg
gagcacatgcaattcaaagacattgtcgccaaggttgcgaatgtggagctgtactacaag
gccgttcacttctacttgcaagaacaccctgatataatcaacgatcttctcaatgtgctt
gctctgcggttagaccacacacgtgtcgttgatattatgcgcaaggctggtcagttgcgc
cttattaagccgtacatggttgcagttcagagcaacaatgtttctgctgtaaatgaagct
ctgaatgagatatacgtagaagaagaagactatgacaggttgcgcgagtctactgatttg
catgatagctttgaccagataggcctcgctcagaagattgagaaacacgagcttgtggaa
atgagacgtgtggctgcgtatatctacaagaaagctggtagatggaagcaatcaattgct
ttgtcgaagaaagataatatgtacaaggactgtatggaaactgcttcacaatccggcgac
catgaccttgcagaacaacttctggtttacttcatcgaacaggggaaaaaggaatgcttt
gctacgtgtctctttgtgtgttatgacttaatccgaccagatgttgctctagaacttgca
tggaccaacaacatgattgactttgccttcccgtatctcctccagtttatccgagaatac
tctggcaaagtggatgaactgatcaaggacaagctagaggctcagaaagaagtgaaggct
aaagagcaggaagagaaggatgtcatgtctcaacagaacatgtacgctcaactattgcca
ctggctctacctgcaccaccgatgccgggaatgggaggaggtccagggatgggaggcggt
tacggtccaccaccaccgatgggcggaatgccaggaatgtctccgatgccaccgtatgga
atgccaccgatgggcggctactaa

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