Brassica oleracea (wild cabbage): 106334522
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Entry
106334522 CDS
T04124
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04142
Lysosome
boe04144
Endocytosis
boe05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106334522
04142 Lysosome
106334522
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
106334522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106334522
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106334522
Membrane trafficking [BR:
boe04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
106334522
Exosome [BR:
boe04147
]
Exosomal proteins
Proteins found in most exosomes
106334522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
106334522
NCBI-ProteinID:
XP_013628267
UniProt:
A0A0D3BAN9
LinkDB
All DBs
Position
C3:complement(24350438..24359358)
Genome browser
AA seq
1707 aa
AA seq
DB search
MAAANAPITMKEVLTLPSVGINQQFITFTNVTMESEKYICVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVPGTTQDHLQIFNIEAKAKLKSHQMPEQVAFWKWI
TPKMLGLVTQTSVYHWSIEGDSEPVKMFDRTANLANNQIINYKCSPNEKWLVLIGIAPGS
PERPQLVKGNMQLFSVDQQRSQALEAHAASYAQFKVPGNENPSILISFASKSFNAGQITS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQVSHKFNLIYVITKLGLLFVYDL
ETASAIYRNRISPDPIFLTSEASSVGGFYAINRRGQVLLATVNEATIIPFISGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNSYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYMFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRVAQLCEKAGLYIQSLKHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSSEWAMECMKDLLLVNLRGNLQIIVQACKEYCEQLGVDSCIKLFEQFK
SYEGLYFFLGSYLSMSEDPEIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSKVVGKYCEKRDPTLAVVAYRRGQCDEELINVTNKNSLFKLQARY
VVERMDGDLWDKVLVEENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVDAQLYE
EAFAIFKKFNLNVQAVNVLLDHVGSIERAVEFAFRVEEDSVWTQVAKAQLRDGLVSDAIE
SFIRADDASHFLEVIRACEDTNVYDDLVRYLLMVRQKVKEPKVDSELIYAYAKIERLGEI
EEFILMPNVANLPNVGDRLYDEALYEAAKIIYAFTSNWAKLAVTLVKLQQFQSAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNVIIQVDDLEEVSEYYQNRGCFSELISLMESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWQELTYLYI
QYDEFDNAATTVMNHSPEAWEHMQFKDIVAKVANVELYYKAVHFYLQEHPDIINDLLNVL
ALRLDHTRVVDIMRKAGQLRLIKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESTDL
HDSFDQIGLAQKIEKHELVEMRRVAAYIYKKAGRWKQSIALSKKDNMYKDCMETASQSGD
HDLAEQLLVYFIEQGKKECFATCLFVCYDLIRPDVALELAWTNNMIDFAFPYLLQFIREY
SGKVDELIKDKLEAQKEVKAKEQEEKDVMSQQNMYAQLLPLALPAPPMPGMGGGPGMGGG
YGPPPPMGGMPGMSPMPPYGMPPMGGY
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcaaacgccccaatcacgatgaaggaggtcctaacgctaccgagcgttggg
atcaatcaacagttcatcacgtttacaaatgtcactatggagtctgagaagtacatatgt
gtacgagagactgcaccgcagaacagcgttgttattattgatatgaatatgccgatgcag
cctctaaggagacctatcactgcagactctgctctcatgaacccgaactctaggatcctt
gccttgaaagctcaagttccaggaactactcaggatcatctgcagatatttaatatcgaa
gcaaaagcaaagttgaaatcacatcagatgcctgagcaggttgctttttggaaatggatt
acaccaaagatgttggggctggtcacacaaacttctgtgtatcattggtcgattgaaggt
gattccgagccagttaagatgtttgatagaacggccaatttggcaaacaatcaaattatt
aactataagtgctctcctaatgagaagtggttggtgttgattggaattgctcctggctct
cctgagaggccacaattggtaaaagggaatatgcagcttttctctgtggatcaacagcgg
agccaggctcttgaagcacatgctgcttcatatgcccagtttaaggtccctgggaatgag
aatccttcaatactcatatcctttgcaagcaagagctttaatgctggacagataacatca
aaattgcatgtcattgagcttggtgcccaaccaggaaaaccatcgtttacaaagaagcag
gcagatctctttttcccccctgattttgcggatgattttcctgtagccatgcaggtctct
cacaagtttaacttgatatatgtcatcaccaagcttggcctgttatttgtatacgattta
gaaacggcttctgcaatctacagaaatcgtataagtccagaccctattttcttaacttct
gaagcttcctcagttgggggtttctatgccattaataggcgaggacaagttcttttggct
acagttaacgaggctacgataataccttttattagcggtcaattgaacaatttagaactt
gctgtcaatcttgcgaaaagaggaaacctccctggtgcagaaaacctggttgtccaacgg
ttccaggagttatttgctcaaacaaagtataaggaggctgctgagcttgctgctgaatct
cctcaggggattctacggacacctgatacggtggctaaattccagagtgttcctgtacaa
gcagggcaaactcctccattgttacagtattttgggacccttttgactagagggaagctc
aattcatatgagtctttggaactatctcgtcttgttgtgaatcaaaacaagaagaacctc
ttggaaaactggttggcagaggataagttagaatgcagtgaagaacttggagaccttgtc
aagactgtggataatgaccttgctctgaaaatatatatcaaagctcgagctactccaaaa
gttgttgcagcttttgcagagcgaagggagtttgacaaaatattaatttactcaaagcag
gttgggtacacacctgattacatgtttcttctgcaaaccatactccgtacggatcctcag
ggagcagtaaattttgctttaatgatgtcccaaatggaaggaggttgtccagttgactac
aacaccatcactgatcttttccttcagagaaatctgatacgtgaagcgactgctttcctt
ctcgatgttctgaagccaaatttacctgagcatgcttttctgcaaactaaggtgctggag
atcaatttggtaacctttcctaatgtggctgatgcaattttagcaaatgggatgttcagc
cactatgaccgtcctcgtgttgctcagctttgtgaaaaggctggactttatatccaatct
ttaaagcactactcagagttacctgatataaaacgtgtaattgtgaacactcatgctatt
gagccacaggctcttgttgagtttttcggtaccctttccagcgaatgggctatggagtgc
atgaaggatcttctgctggtcaacctgagaggcaaccttcagataatcgttcaggcttgc
aaggagtactgcgagcaacttggtgttgattcatgcattaaactctttgagcagttcaag
tcgtacgaagggctatactttttccttggttcatatttgagtatgagtgaggatcctgag
attcacttcaagtacattgaagcagctgccaagactggtcaaataaaggaggttgagcgt
gttactagagagtctaacttttatgatgctgaaaagacgaagaactttttgatggaagcc
aagcttccggatgccagacctctgataaatgtctgcgaccgtttcggctttgtccctgat
cttactcattacttgtacacaaacaacatgcttcgttacattgaaggttacgttcaaaag
gtgaatcctgggaatgctcccctagttgtgggacagttgcttgatgacgaatgccctgaa
gattttataaaaggcctcattctctctgttcgttcattgcttcctgttgaaccccttgtt
gacgaatgtgagaagagaaatcgactccgtctcctcactcagttcttggagcatctagtt
agtgagggaagccaagatgtgcatgtccataatgctttgggtaaaattatcatagacagt
aacaacaaccctgaacatttcctgaccaccaacccttactacgactctaaggttgtgggt
aagtactgtgagaaacgtgatcccaccctggctgttgtggcatacagaaggggacaatgt
gatgaggaactcatcaatgtcaccaacaagaactctttgttcaagttacaagccaggtat
gtagtggagaggatggatggtgacctttgggataaggttcttgtggaagaaaacgaatat
agaagacaacttattgaccaagttgtgtctactgctttacccgaaagcaagagcccggag
caagtttctgcagctgttaaagcattcatgactgctgatctgccgcatgagcttatcgag
cttctggaaaagattgtgcttcaaaattctgccttcagtggaaacttcaatctgcaaaat
ctgttaatattgacagctatcaaggccgatccgtctagagttatggattacatcaacagg
ctagataattttgatggtccggctgttggagaagtggcggttgatgcccaattgtatgag
gaagcatttgccattttcaagaagtttaacctaaatgtccaggctgtcaacgtattgttg
gatcacgtcggaagcattgagcgtgccgttgagtttgcattccgggtcgaagaagattct
gtttggacccaagtcgccaaggctcaactcagggatggactagtcagtgatgcaattgag
tcctttatccgagctgatgatgcctctcatttcctggaggttatccgcgcctgtgaagat
actaatgtttatgatgacttggtcagataccttcttatggttagacagaaggtgaaggaa
cccaaggttgatagtgagctcatctatgcttatgcaaagattgaaagattgggtgagatt
gaagaatttattctgatgccaaacgttgctaacctaccaaatgtgggcgatcgcctgtat
gacgaagcactgtacgaggctgcaaaaataatttatgcgttcacatcgaactgggccaag
ttagccgtcacacttgtgaagttgcagcagttccaaagtgccgttgatgctgcaaggaaa
gcaaacagtgcaaagacatggaaggaagtttgcttcgcttgtgttgatgctgaagaattc
cgcctggctcaaatatgtggacttaacgttatcatacaggtggacgacctggaagaagtc
agcgagtactaccagaacagaggatgcttcagtgaattaatctcactgatggagagtgga
cttggtctggaacgggctcacatggggatcttcaccgagttgggtgtactgtacgccaga
tatcgctacgagaagcttatggaacacatcaagttgttctcgactcgcctcaatattccc
aagcttatacgggcctgtgatgagcaacagcattggcaagaacttacctatctgtacatt
cagtatgatgagtttgataacgctgcaaccactgtgatgaaccattctcctgaagcatgg
gagcacatgcaattcaaagacattgtcgccaaggttgcgaatgtggagctgtactacaag
gccgttcacttctacttgcaagaacaccctgatataatcaacgatcttctcaatgtgctt
gctctgcggttagaccacacacgtgtcgttgatattatgcgcaaggctggtcagttgcgc
cttattaagccgtacatggttgcagttcagagcaacaatgtttctgctgtaaatgaagct
ctgaatgagatatacgtagaagaagaagactatgacaggttgcgcgagtctactgatttg
catgatagctttgaccagataggcctcgctcagaagattgagaaacacgagcttgtggaa
atgagacgtgtggctgcgtatatctacaagaaagctggtagatggaagcaatcaattgct
ttgtcgaagaaagataatatgtacaaggactgtatggaaactgcttcacaatccggcgac
catgaccttgcagaacaacttctggtttacttcatcgaacaggggaaaaaggaatgcttt
gctacgtgtctctttgtgtgttatgacttaatccgaccagatgttgctctagaacttgca
tggaccaacaacatgattgactttgccttcccgtatctcctccagtttatccgagaatac
tctggcaaagtggatgaactgatcaaggacaagctagaggctcagaaagaagtgaaggct
aaagagcaggaagagaaggatgtcatgtctcaacagaacatgtacgctcaactattgcca
ctggctctacctgcaccaccgatgccgggaatgggaggaggtccagggatgggaggcggt
tacggtccaccaccaccgatgggcggaatgccaggaatgtctccgatgccaccgtatgga
atgccaccgatgggcggctactaa
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integrated database retrieval system