Brassica oleracea (wild cabbage): 106334548
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Entry
106334548 CDS
T04124
Name
(RefSeq) chaperone protein ClpC1, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
boe03110
]
106334548
Chaperones and folding catalysts [BR:
boe03110
]
Heat shock proteins
HSP100
106334548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
UVR
TniB
AAA_14
AAA_28
NACHT
Mg_chelatase
AAA_18
Zeta_toxin
AAA_25
IstB_IS21
Torsin
DNA_pol3_delta2
AAA_23
Glyco_hydro_3_C
Motif
Other DBs
NCBI-GeneID:
106334548
NCBI-ProteinID:
XP_013628301
UniProt:
A0A0D3B420
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All DBs
Position
C3:8832476..8836851
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AA seq
930 aa
AA seq
DB search
MAMATRVMSQSTPLSLACSQRNAPSRGSGNSKRSVKMMCTQLRVSGSSRMQGFLGLRGNN
ALDTLGRSRQSFGGKVRHAMNVPKGKGSRGVVKAMFERFTEKAIKVIMLAQEEARRLGHN
FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKR
VLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGENN
EVTANVGGGSGSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC
LIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM
EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIE
KDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYISDR
FLPDKAIDLIDEAGSRVRLRHAQVPEEARELEKELRQITKEKNEAVRGQDFEKAGTLRDR
EIELRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQHIVSSWTGIPVEKVSTDESDRL
LKMEETLHKRVVGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA
AYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI
EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD
EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILLQEVFERLKK
KEIELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV
DSEGKVTVLNGGSGTPTTSLEEQEDSLPVA
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggctatggccacaagggtgatgtctcaatctactccactgtctctggcatgttcccag
aggaacgctccctctcgtggatctggcaactcaaaaagatcggtgaaaatgatgtgcact
cagctacgagtctctggttcctcaagaatgcaagggttcttggggttgcgtgggaacaat
gccttagacactctagggagatcccgtcagagtttcggtggtaaagtgcggcatgcgatg
aatgtacccaaggggaaaggtagccggggtgtggtcaaagcgatgtttgagaggtttact
gagaaggctatcaaggttattatgcttgctcaggaggaagctaggagactaggccacaat
tttgtggggaccgaacagattcttctagggcttattggtgagggtactggaatcgctgct
aaggttttgaagtccatggggattaaccttaaggatgcacgtgtggaggttgagaagatt
attggaaggggcagtgggtttgttgctgttgagatcccgtttactcctcgtgcaaagcgt
gttcttgaactctcactggaagaagctcgccaactcggtcacaattacatcggttccgag
caccttcttcttgggttgctacgtgaaggtgaaggtgttgctgctcgagtccttgagaat
ctaggtgcagatcctagtaacattcgcactcaggtgatacgcatggtgggtgagaacaat
gaggtcactgctaatgttggaggaggaagcggcagcaataagatgccaactcttgaagag
tacgggacaaacttgacgaagctggctgaggagggtaaattggacccggttgttggtagg
cagccacaaatagaacgtgtcgtgcaaattcttggtaggagaaccaagaacaacccatgt
cttattggagaacctggtgttggtaagacagctattgccgaaggactagcgcagcgtatt
gccagtggagatgttcctgaaacaattgaagggaagaaggttataacacttgacatgggt
cttctggttgctggaacaaaatatcgtggagagtttgaagagagattgaaaaagcttatg
gaggaaattaaacagagtgacgagatcatcttgtttatcgatgaagtgcatactttgatt
ggagcaggagcagcagaaggtgcaattgacgcagctaacattttaaaacccgctctcgct
agaggtgaattgcagtgcattggagcgacaacattagacgaatacaggaagcacattgag
aaagaccctgcattggaaagaagattccagccagtgaaagtacctgagcctactgtggat
gaaactattcagatcctaaagggtctgcgagagcgatatgaaattcatcataagcttcgt
tacactgacgagtctttagtagcagctgcacagttgtcataccagtatatcagtgatcgt
ttcctacctgacaaggcaattgacttgatcgatgaagctggttctcgggttcgacttcgc
catgcacaggtccctgaggaagctagggagcttgagaaggaacttaggcagataacaaag
gagaagaatgaagctgtccgtggccaggactttgagaaggctgggacacttcgggataga
gaaattgagctcagagctgaggtgtctgctatccaagcgaaaggcaaggagatgagcaaa
gcagagagtgagactggtgaggaaggtcctatggtgacagagtcagacatccaacacatt
gtgtcttcatggactggtatccccgtagagaaggtatcaaccgatgagtctgatcgtctc
ctcaagatggaagaaaccctccacaaacgtgtcgtaggccaagacgaagctgtcaaagcc
ataagccgagccattcgccgtgcacgtgttggactcaaaaaccctaaccgtccaatagcc
agtttcatattctctggtcctactggtgtcgggaaatcagagcttgccaaagctttggca
gcttactactttggatctgaagaagccatgattcgtctagatatgagtgagttcatggag
aggcacacagtctcgaaactcataggttcgcctcctggatacgtcggttacactgaagga
ggtcagctaacggaagcagttagacgtcgcccttacacagtcgttctgttcgacgagata
gagaaagcccacccagatgttttcaacatgatgcttcagatcctcgaagatggtagacta
acagacagcaaaggaagaacagtggacttcaaaaacacgcttctcatcatgacatcaaac
gtcggcagcagtgtgatcgagaaaggaggaagacgtattggtttcgacttggactacgac
gagaaagacagcagctacaacagaatcaagagccttgtgaccgaggagctgaaacagtac
ttcagaccggagttcctaaacaggcttgacgagatgattgtgttcagacagctaacgaag
ctggaagtgaaagaaattgcggacatactgctacaggaggtgtttgagaggctgaagaag
aaggagattgagcttcaagtgacagagaggttcagagagagagtagtggacgaaggttat
aacccgagctatggagcgagaccattgaggagagccatcatgagacttttagaggatagc
atggcggaaaagatgctagcgagagagatcaaggaaggagactcggtgattgtggacgtt
gactcggaaggtaaagtgactgtgctaaatggtggaagtggcactcccacaacatccttg
gaggagcaggaagattctctccccgttgcttga
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