Brassica oleracea (wild cabbage): 106334578
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Entry
106334578 CDS
T04124
Name
(RefSeq) serine/arginine-rich splicing factor SC35
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106334578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106334578
Spliceosome [BR:
boe03041
]
Common components
Common spliceosomal components
SR proteins
106334578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
106334578
NCBI-ProteinID:
XP_013628332
UniProt:
A0A0D3BF63
LinkDB
All DBs
Position
C3:36447600..36449780
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AA seq
280 aa
AA seq
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MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYKDEAHKAVERLDGREVDGREITVQFAKYGPNAEKISKGRVVEPPPRSRRSRSRS
PRRSRSPYRRRSPRRSRSPRRRSRDDYRERDYRKRSRSRSNERGRDRHHDKDRDYRRRSR
SRSASPDDKRRVRGRYDDERRSRSCSLSASPARRSPSPRSASPLKASPERQSKERSLTPA
SRSRSPRSPSLEKASPESKSNDRSPSPRDTARSQSPNAEE
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcggaaggtcaggtccgccggatatcagcgacacctactctcttctcgtc
ctcaacatcactttccgcacgactgcagatgatctttatcctctattcgctaagtatggg
aaagtcgtggatgtcttcatccccagagatcgaaggactggtgattcgcgtgggtttgca
tttgttcgatataagtataaagatgaagctcacaaagctgtggaaaggcttgatggacga
gaggttgatggcagagaaatcactgttcagtttgctaaatacggccctaatgcggagaag
atttccaaaggaagagttgtggaaccacctccaaggtcacggaggtcaagaagccgtagt
cctcgaaggagccgtagcccgtatagacgccgtagtcctaggagaagccgcagtccccgc
aggaggtcccgagatgattacagggaaagagactacaggaagaggagcagaagtagaagc
aatgaaagggggcgtgataggcatcatgacaaggatagagattatcgccgtcgcagtagg
tctcgtagtgccagccctgatgacaaacgcagagtcagaggccgttatgatgatgagaga
cgcagtcgcagttgctccttgagtgcatctcctgctcgccgcagccccagccctagaagt
gcctccccactaaaagcctctcctgaacggcaaagcaaagagaggtctctaactcctgct
tcccgcagccgtagcccaagaagtccttccctggaaaaggcctctcctgagagtaagagc
aatgataggtccccgtctcctcgggacacagctcgtagtcagtctcctaatgcggaggaa
tga
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