Brassica oleracea (wild cabbage): 106334586
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Entry
106334586 CDS
T04124
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03440
Homologous recombination
boe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106334586
03460 Fanconi anemia pathway
106334586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106334586
03036 Chromosome and associated proteins [BR:
boe03036
]
106334586
03400 DNA repair and recombination proteins [BR:
boe03400
]
106334586
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
106334586
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
106334586
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
106334586
FA (Fanconi anemia) pathway
Downstream FA components
106334586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
BRCA2
Motif
Other DBs
NCBI-GeneID:
106334586
NCBI-ProteinID:
XP_013628341
LinkDB
All DBs
Position
C3:154452..160920
Genome browser
AA seq
1103 aa
AA seq
DB search
MSTWSLLPDSSGNCFRWEVAGRILQSDSEDSAIESTAPLPSMNDLLLQGWSKLKQGDGAL
FRTGMGNSVALKAKSVLEDEHHHHPDGGSNLQSDSAATLPMFRTASGRSVPLKDSSIAKA
ISILGPPHSDNVPLRESGFGDPNSFFQTPSNKMVIVDDFTGFNHVKRSNQKRGCSELKTH
ATGVLHHSETPGQYEGHVFQKISESLYPSAVVPPTMFQTAGGKTLSVSVQALKRARNLLG
DPDSVTLFDDVPAVDQFSTPQKVQRLGDLPINNRNANTGYNAFEGKTSNKHTATSFVSPL
RSSSKQFRSVKLEDLASGGNLIKKFDAAVDDTDRALNTTKLATHGVSNNRPMAVNNAKAN
GFIPIAKQSGQPLVDITNRSANNKQDSTQKKRLGKTIFVSPFKKPRNSSFKTPLKKNAQH
ALSGLSIVSSDTLNSKKVLSTRYPERSPRVYIKDYFRMHPTVTTKMNYVPDHVRRIKSSN
ADKYVFRDESSSNMVGAETFFQMLAESGASLRQASRKWVINHYRWIVWKLACYETCYPVI
CRGNFLTITNVFEELKYRYEREVNHGHCSAIKRILSGDAPASSMMVLYISAINPKTDNDS
QKALGSGSGSNVKVELSDGWYSMNAALDVNLTKQLNAGKLFVGQKLRILGAGLSGWATPT
SPLEAVISNTICLLLNINGTYRAHWADRLGFCKEVGAPLAFNCIKGNGGPVPKTLAGITR
IYPILYKERLGERKSIIRSERMESRMTELHNQRRSALIEGLMCEYERGGNGVHSQNDTDS
EEGAKVFKLLETASEPELLMAEMSLEQLTSFTTYKSKFEAAKQIQMEKSVAQALEEAGLS
ERDVTPFMRIRLVGLTSLSYEGVHNPKEGIVTIWNPTERQRTELTEGKIYIMKGLVPTVS
DSETLYLHARGSSSRWEPLSPKASSSFQPFFNPRKPISLSNFGGIPLSSEFDIAAYVVYV
GNVYTDVEQKKQWVFVTDGSTQRSRSGEISNSLLAISFSTPSMDDLPTPHISHSLVGSVV
GFCNLIKRAKDAKNNMWVGEATENSVYSINAEAAYSSHLKTSSSHIQTWAKLSSFNSVIH
KLRQIVLFVIGASTCSRKGKHII
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggagtttattacccgattcaagcggcaattgtttccggtgggaagtcgca
ggccggattctccagtcggactcggaagattctgctattgaatccacagctcctctacct
tctatgaacgatctcttgctccaaggatggtcgaagcttaaacaaggggatggagcgctg
ttcaggactggaatggggaattctgtagctctcaaagccaaatctgttttagaagatgaa
catcatcatcatccagatggaggctccaatctccaatcagattcagctgcaactttgcct
atgttcaggaccgcctcagggcgttctgtcccattgaaagactcctccattgccaaagct
atttctattcttggcccccctcactcagataacgttcctctcagggagagtgggtttggt
gatcccaactcttttttccagacaccttctaacaagatggttattgtagatgactttact
ggatttaaccacgtgaaacggtccaatcagaaacgtggctgctctgagttaaaaactcat
gctacaggggttctgcatcattcagaaactccaggccagtacgagggccatgtatttcag
aagatatcagaaagtttatatccatctgcagtggtgccgccaacaatgtttcagactgct
ggtggaaaaacgttgtctgtatcagttcaggcattgaaacgtgccagaaaccttctcgga
gaccctgactcagtgactctctttgatgatgtaccagcagttgatcagttttctacacca
cagaaagttcaaaggttaggtgatcttcctataaacaatagaaacgccaacactggttat
aatgcttttgaaggaaagacaagcaacaagcatacggcaactagttttgtatctcctctt
cggtcatcttcaaagcaatttagatcagtcaaattggaggatctagcttcagggggtaat
ttgatcaagaaatttgatgcggctgttgatgacacagaccgtgctctgaatactactaaa
cttgctacacatggagtatcaaataacaggcctatggcagtgaataatgccaaggcaaac
ggtttcattccaatagctaaacaatctggccagccacttgttgatataacaaatcgcagt
gcaaacaataaacaagacagtacccaaaagaaaagactgggaaagacaatcttcgtttct
ccttttaaaaagccaaggaattcctccttcaaaactcctttaaagaaaaatgctcagcat
gctttaagtggtttgtctatcgtatcttctgatacacttaattccaaaaaggtgctttct
acaagatatccagaaaggtctccaagagtatatatcaaggattattttcgaatgcatcca
acagttacgactaagatgaactatgtgccagaccatgtcagaagaatcaaatcaagcaat
gcagataaatatgtattccgtgatgagtcttcctcaaatatggttggagctgaaactttt
ttccaaatgttggctgagtctggtgcttccctacgacaagcatctagaaagtgggtcatt
aatcactacagatggatcgtctggaaacttgcatgctacgagacatgctacccagtcata
tgtagaggaaattttctgactatcaccaatgttttcgaagaactgaaatacagatatgag
cgagaggtcaatcatggtcactgctctgcaatcaagaggattctgagtggtgacgctcca
gcttcttcaatgatggtgctctacatatcagctattaatccaaagacggataatgattct
cagaaagcacttggttctggtagtggcagcaatgtgaaagtagagctcagtgatgggtgg
tactccatgaatgctgccctggatgtcaacctgacaaagcagctgaatgctggaaaattg
tttgttggacagaagcttcgaatccttggggcaggactttctggttgggctacaccaaca
tcacctcttgaggcagtgatttcaaatacgatttgtttgctgttgaatattaatgggacg
tacagagctcactgggcggaccgactaggattctgtaaagaagttggtgctcctctggcc
ttcaactgtatcaagggcaatgggggtccagtgcctaaaacgttagctggaatcacacga
atataccctatcctgtacaaggaaaggttaggtgaaaggaagtcaattattcgatcagag
agaatggaaagtagaatgactgagctgcataaccagaggcgctcagctcttattgagggt
cttatgtgtgagtacgagagaggaggaaatggtgtccacagccagaacgacactgacagt
gaggaaggagccaaggtctttaagctgttagagactgcttctgaacctgaactcctaatg
gcagaaatgagtctggagcagttgacatctttcactacatataaatcaaaattcgaggca
gccaaacaaatacagatggaaaaatcagtggcacaagctctggaagaagctggcttaagt
gaaagggatgtcaccccattcatgaggattaggcttgttggactgacgagtttaagttat
gaaggagtacacaatccaaaagaaggcatagtaaccatctggaatccaacggagagacag
agaaccgagttgacagaggggaaaatatacataatgaaagggctagtaccgacggtatca
gattcggaaacactttacttacatgccagagggtctagctcaagatgggagcctttgtct
ccaaaagcttcttcaagttttcagccctttttcaacccccgtaaacccatttctttgtca
aattttggtggaattcctctttcaagtgaatttgatatcgctgcgtacgttgtatatgtt
ggaaatgtatacacggatgttgagcaaaagaagcagtgggtgtttgtgacagatggatcc
actcaacgctcacgttcaggggaaatctcaaacagtcttcttgctataagcttcagtacc
ccatccatggatgacttgcccactccccacatcagccatagtcttgtcggatccgtggta
ggattttgcaacctaataaaaagggcaaaggatgcgaaaaacaatatgtgggttggagag
gcaacagagaactcagtgtattccataaacgcagaagctgcttactcctctcacctcaaa
accagcagttcccatatccaaacatgggctaagctctcttctttcaactcggtaatccat
aaacttaggcagatagttctatttgtaatcggtgcttcaacatgctcaagaaaaggaaaa
catatcatttag
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