Brassica oleracea (wild cabbage): 106334659 Help Entry 106334659         CDS       T04124                                  Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism boe  Brassica oleracea (wild cabbage) Pathway boe03013   Nucleocytoplasmic transport boe03040   Spliceosome Brite KEGG Orthology (KO) [BR:boe00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     106334659   09122 Translation    03013 Nucleocytoplasmic transport     106334659  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:boe03019]     106334659    03041 Spliceosome [BR:boe03041]     106334659 Messenger RNA biogenesis [BR:boe03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      106334659 Spliceosome [BR:boe03041]  Complex C   Other components    EJC/TREX     106334659  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     106334659 SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  106334659 NCBI-ProteinID:  XP_013628429 LinkDB All DBs Position C3 Genome browser AA seq 1802 aa AA seqDB search MSLPLLECKYVTEEFVREGKSGSYGSKLPSSVPMLRFLYELCWVLVRGELPIQSCKVVLE KVKFLDDPSKEELASCFADVVTQIAQDLTMSGDHRSRLTKLAKWLVESQTVPQRIFQERC EEEFLWEAEMVKIKAQDLKGKEVRLNTRLLYQQTKFNLLREESEGYAKLITLLCRGSAGS SHNASAATMGIIKSLIGHFDLDPNRVFDIVLDCFELEQDYDTFLNLIPIFPKSHASQILG FKFQYYQRLEVNSPVPSGLYKLTALLVKKNFISLESIYAHLLPKDEEVFEDYNTYSAKRF EEANNIGKINLAATGKDLMEDEKQGDFKVDLYAALDMETEAVAERIPELENNQTLGLLDG FLSVDDWGHANIMFERLAPLNPVAHNHICDGLFRLIEKRITHAYRIARQTRFQNSSSAGS EKIAHAANTSASKTCSDLKEVFQMLVTVGPYLYRNTQLLQKICRLLRVYYLSALDLVRSS DGSSNQEGSADEIKHLKEARFRVEEALGTCLLSSLQLIPANPAVGHEIWEVMSLLPYEAR YRLYGEWEKDDERNPLLLAARQVAKLDTRWILKRLAKENLKPLGRMVAKLAHANPMTVLR TIVTQIEAYRDMIAPVVDAFKYLTQLEYDVLEYVVIERLVQSGRAKLKDDGINLSDWLQS LASFWGHLCKKYPSMELRGLFQYLVNQLKRGQGIELVLLQELIQQMANVQYTENLTEDQL DAMAGSETLRYHATSFGMTRNNKALVKSSNRLRDSLLPNDEPKLAIPLLLLIAQHRSLVV VNADAPYIKMVTEQFDRCHGILLQYVDFLSSAVTPATAYAQLIPSLEELVHTYHLEPEVA FLVFRPVMRLFKCRRNGDISWPLDSGESIDADSDVSKSESSMILDVGTSEKAVTWSDVLD TVRTMLPSKAWNSLSPDLYATFWGLTLYDLHVPRSRYESEISKQHAALKTLEEVADNSSS AITKRKKEKERIQESLDRLTGELKKHEEHVASVRRRFSREKDKWLSSCPDTLKINMEFLQ RCIFPRCTFSMADSVYCAMFVHMLHSLGTPYFNTVNHIDVLICKTLQPMICCCTEYEVGR LGRFLFETLKIAYHWKSAESIYESECGNMPGFAVYYRYPNSQRVTFGQFVKVHWKWCAKI TKLLIQCLESNEYMEIRNALIMLTKISGVFPVTRKTGYNIEKRVAKIKNDEREDLKVLAT GVAAALSARKSSWVTDEEFGMGYLELKAPPVHTPKHTPSQNGLVGGESTGGRSTANQQPE SGGKDQLSKSKIPDGRTENMPSKSDQGHPKSKGGNPSDAQPSVSKKPVDQKETDESPKIS DENPVKAGSKYSEAELKPSSKRGASATSMNKSTKQDFGKDDGKSGKAAGRTSAADNDVIY LGSRQASLTKASPSTAGNGSLATGSSKVKDDGAEATDTQKQSTRTAHSPRHEISTSSRSS DRLQKRANAVEDSDRTSKRRKADSEHKEHDSEARPSDRDRSAEARVDLNKTPSDDQSTQR DQDRAKDKGNERQDRDHRERVERSDKTRADDVVKARDKSMERYGRERSVERGLDKGTTRS YDRNKDERSKDDRSKLRHSDASLEKAHGDDRSISQGLPPPPPLPPNIVPQSMASKEEPER RAGGTRHSQRLSPRHDERERRRSEENTSVSVEESKRRRDDDFRDRKREDRETIILKGEER EREREREREKSIPLKDDFEASKRRKIKRDQQVSSAEPGEYSPMPHQSSLSMGMGPSSYEG REQRKSSSSMIQHGGYPEEPSIRLLGKEASSKMARRDPDPMYDREWEEDKRQRAERKRRD RK NT seq 5409 nt NT seq  +upstreamnt  +downstreamnt atgtctcttccgctacttgagtgtaagtacgtgacggaggagttcgttcgcgaagggaag agtggcagctacggttccaagctgcccagctccgtaccgatgcttcgtttcctatacgag ctctgttgggttttggttcgtggcgagttgccgattcagagctgtaaggtagtgttggag aaggtgaagtttttggatgatccatcgaaggaagagttagcttcttgttttgcggatgtt gtgactcagatagctcaagatcttaccatgtcgggggatcaccgttctcgcctaacaaaa ttggcaaaatggcttgtggaatcacagacagttcctcaaaggatcttccaagagcgttgt gaggaggagtttttatgggaagctgaaatggttaaaataaaagcccaagatttgaagggg aaagaggtgcgattaaacactcgtcttctgtaccagcagacaaagttcaacttactccgt gaagaaagcgagggatatgccaaattgattacccttttatgccgaggatctgcaggttct tcgcataatgcatcagcagcaactatgggaattatcaagtcattaattgggcattttgac cttgatccgaaccgtgttttcgacattgttttggattgctttgaacttgaacaagattac gacacgtttctcaatctaattcctatctttcccaagtctcatgcttcacaaattcttgga tttaaatttcaatactatcagagattggaggtgaatagtccagttccatctgggctctat aagcttacggccttgctagtaaagaagaatttcatcagtcttgaaagcatatatgcacat ctgctacctaaggacgaagaagtttttgaggattataatacttattctgcaaagcgtttt gaagaggccaataatattggaaagataaatcttgctgctactgggaaggatcttatggag gatgagaagcaaggagatttcaaagttgatctctatgctgctttagacatggaaactgaa gctgttgctgagcgaataccagagcttgaaaataatcagactctgggcctccttgatggt ttcctctctgtggacgactggggtcatgccaatatcatgttcgagcgtcttgcgcctctt aatccggtggctcacaatcatatatgtgatggcttgtttaggcttatagagaaaagaatt actcatgcttatcgcattgcccgtcagacacgttttcaaaattcttcttctgcgggttca gaaaagattgcccacgctgctaatacaagtgccagtaaaacttgttcagatcttaaagaa gtgtttcagatgcttgttacagttggaccctacttgtaccgtaatacacaactgctgcag aagatttgtagactattaagggtttactacttgtcggccttagatcttgttcgcagtagt gatgggtcatcaaatcaagaaggtagtgcagatgaaatcaagcacctgaaggaagctagg tttagagtggaagaagcccttggaacatgccttctgtcatcgttacagttaatacctgca aatccagcagttggtcatgagatttgggaagtgatgagtctccttccatatgaggctcgt tatcgcttatatggtgagtgggaaaaggacgatgagcggaatcctttgctgttggcagca aggcaagtggctaagttggacactagatggattctgaaacggcttgcaaaagaaaatttg aagccgttaggaaggatggtggcaaaactagcgcatgccaatcccatgacggtgcttcgg acaattgtgactcagattgaagcatacagagatatgattgctcctgttgtagacgccttc aaatacttgacacagctagagtatgatgtcctggaatatgtcgtgattgaaagactggtg caaagcggacgagctaaactcaaagatgacgggattaatttatcagactggcttcaatcc ttggcttcattttggggtcacctgtgtaagaagtatccatcaatggagttaaggggtctt ttccagtatctcgttaaccagttaaagagaggccaagggattgagcttgttcttctccag gaactgatccagcagatggcaaatgtacaatacactgagaaccttactgaagatcagttg gatgccatggcaggaagtgagacattacgttatcacgcaacatcctttggcatgacacgg aacaacaaggcacttgtcaaatcatccaaccgtctacgagattcgttactcccaaatgac gaaccaaagctagctatcccccttttgttacttatcgcccagcatcgttcactggttgtg gtaaatgcggatgcaccctatattaagatggtcactgaacagttcgacagatgtcatgga attctcctccaatacgtggactttctttctagcgctgttactcccgctactgcttatgct cagctcataccttcgcttgaagagcttgttcatacataccatcttgagccagaggtcgct tttttggtatttcgacctgtgatgaggctctttaagtgtcgacggaatggtgatatttca tggcctttggacagtggggaatctattgatgcagattccgatgtatcaaaatctgagagt tccatgattcttgatgtcggcacatctgaaaaagctgtaacgtggtctgatgttcttgat acagtaagaacaatgctgccctcgaaagcttggaatagtctgtcgccagacctctacgct acattttgggggcttactctgtatgatctccatgttcccagaagtcgttatgagtctgag atatctaaacaacatgctgcccttaagactctggaagaggttgctgataattccagctct gcaattacgaagagaaaaaaagagaaggaaaggattcaagaatctcttgatcgtctaacc ggtgaactgaaaaagcatgaagaacatgttgcctctgtccgtagaaggttttcacgtgaa aaggataaatggttgagctcctgtcctgatactttgaagatcaatatggagttcctgcaa cgttgtattttccctcgttgcacatttagcatggcagattctgtgtactgtgctatgttt gtacatatgctccactctcttggaacaccctattttaacacagtcaaccacattgatgta ctgatatgtaaaacgctacaaccgatgatctgctgctgcactgaatacgaagttggacga cttgggaggtttttattcgagaccttgaagattgcataccactggaagagcgcagaatca atctatgaaagtgaatgcggaaacatgcctgggtttgctgtttattatagatacccgaac agccagcgtgtcacatttggacaatttgtgaaggtacattggaaatggtgtgcaaaaatc acaaagcttttgatccagtgtctggagtcaaacgagtacatggagattcgtaatgccctt attatgctaacaaaaatatctggtgttttcccagttactcggaaaactggatataatatc gagaaacgggtagcgaaaattaaaaatgatgagcgagaggaccttaaggtcttggcaact ggtgttgccgctgctctatctgcaagaaaatcatcatgggttactgacgaagaatttggc atgggttaccttgaactaaaggctccgccagtacatactcctaaacatactccttcccag aatggcttggtaggtggtgaatcaactgggggaagatctactgctaaccagcagcctgag tctggcggcaaggaccagttgtcaaaaagtaaaataccagatggaagaacggaaaatatg ccttcaaaatctgatcaaggacatccaaaatcaaagggaggcaatccatcggatgcccaa ccatctgtgtctaagaaaccagtggaccaaaaggaaacagatgaatcacccaaaatatct gatgagaatcctgtcaaagctggttcaaagtactctgaagccgagttaaaaccttcttct aaacgaggtgcatcggctacatcgatgaacaaatcaacaaagcaagattttggaaaagat gatggaaagtccggtaaagctgctggaagaacatccgcagctgacaacgatgttatttat ctggggagcaggcaagcaagtttgaccaaagcttctcccagcacagcaggcaatggtagc ttagctactggttcttccaaagtgaaagatgatggtgctgaagctacagatactcaaaag caatctactcggactgctcattcccctaggcatgaaattagcacttcttcgaggtcgagt gataggttacagaaacgagctaatgctgttgaagatagtgacagaacaagtaaacgccgt aaagcagactctgagcacaaagagcatgacagtgaggctcgaccgagtgatagagacaga tcagcagaggctagggtggatttaaacaaaacacccagtgatgaccaaagcacccagaga gatcaagacagggcaaaggataagggtaatgaaagacaggacagggaccacagagaaaga gtcgagcgttctgataaaactcgtgcagatgatgtggtaaaagcacgagataaatccatg gaacgctatggtagagagcgctcagttgagagggggcttgataaaggaacaactaggagt tacgatagaaacaaggatgaaagaagcaaagatgacagaagcaaattgcgtcatagcgac gcgtcacttgagaaagctcatggtgatgatcgttctatttctcaaggcttacccccacct ccaccgctacctcctaacatcgttccacaatctatggcctcgaaagaagaacccgaaagg agggccggaggtacaaggcattcccagaggctttctccgaggcatgatgaaagagagaga cgacgctctgaagagaatacatcagtttctgtggaagagtcgaaacgaagaagagatgac gattttcgtgaccgaaagcgagaggaccgagaaaccatcatcctgaagggagaagaaagg gaaagagagagggaaagagaaagagaaaaaagtatcccattgaaagatgattttgaagcc tccaagagaaggaagataaagagggatcaacaggtctcatctgcagagccaggggaatac tctccaatgccacaccagtcatctttgtcaatgggtatgggaccatcatcgtacgaaggc agagagcagcgaaagagcagtagtagtatgattcaacatggaggttatcctgaagagcca agcatcagacttcttggcaaagaagcttccagcaagatggctcgtcgtgatcctgaccca atgtatgatcgtgagtgggaagaagacaagaggcagagagcagaacggaagcggagagat cggaagtag

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