KEGG   Brassica oleracea (wild cabbage): 106334682
Entry
106334682         CDS       T04124                                 
Name
(RefSeq) uncharacterized protein LOC106334682
  KO
K12825  splicing factor 3A subunit 1
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106334682
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:boe03041]
    106334682
Spliceosome [BR:boe03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    106334682
 Complex B
    106334682
 Complex C
   U2 SnRNP specific factors
    106334682
SSDB
Motif
Pfam: Surp ubiquitin YukD
Other DBs
NCBI-GeneID: 106334682
NCBI-ProteinID: XP_013628464
UniProt: A0A0D3BIE8
LinkDB
Position
C3:51027925..51031185
AA seq 858 aa
MTWPPQPPPEILVVIERTARAVAQLGLEHEKLILEANRCIENAPYKPPGSKTVLEVERSG
FLKSCDHPYHQVYRKKRDAYFAQCQDGVIHFLRPKFDDDDDLKPPPNRDDPPPPPHPPPD
DITPIDLGLVKVTALFVARYGQQFWHALIDMPMCPHFSFLNSSDKTFSYYNGLVGLYHRV
LRPFPPDADEAPLGEFFRYVQLEKLHQKLTDLHALAYGLDCMDDRDASPLAMPPSFFSLM
TMPHHPNQDEDDIQPQCEPHPIPPYMFPVRISLEELVIIKLTALFVSRYGQCFLRALMMR
EVSNPHFDFLFFRWDQRPQFPSMEPAEIRSHVFNVLVYAYSKILMPSKRANDPGFCSVVV
LAVFSSRLLRLEKPKLGEGVKTRAIIDLHAFVAGVDYLAHMHEPQYSGIMSPPQRLSVMI
KNLQSPLQTPHPGILVLLPLGRKLSDYPQCSRSMCSHLEYTFPQSIGPDELGVIKLTALF
VTRYGMFFMEALMKIAPTEFEFLKLTHSRRALFFAFIDVYSSILKPFTKGGDHLAMALEF
FFYCLQLNKLKKGVAVMELSAFLSGVDHFAWMDVNGYSAIVAAPECRSVMMNRLTQIDTG
GGLDQPPTLRTPFSFPSNYYGFSSPRDIAIIKLTAVFVARYGVRICRELKKKLDARTVLK
FMEPSDELFHFYEVAVHAYSNILEGSDDADTETVIERYFHCVQWEEQKEEGSMTFDDDLY
GFVEAVDCFAQLEDGYFFQMMGNIHLVHPCDCLYDQTSSSEPKRRKVDESSSVIEDSSTI
KVWVPTVYGRKVIKIAVGSLSEKVSSLMEKIANEIQMPAKDLKLRGKEGVLKGDKSLAQN
DVETGEILTLTWRISRWY
NT seq 2577 nt   +upstreamnt  +downstreamnt
atgacgtggccaccacaacctcctccagaaatcttagtagtgattgagagaacagcacgt
gcggtagcccagttgggcttagagcatgagaagttaatcttggaagccaatcgttgtatt
gagaatgcaccttacaagccgcctggtagcaagactgtattggaggttgaaaggtccggc
tttttgaagagttgtgatcatccctatcaccaagtctacaggaaaaagcgcgatgcatac
tttgctcagtgccaagatggggtgattcatttcctacgacctaaattcgatgatgatgat
gatctcaagcctcctcccaatagagacgaccctcctcctcctcctcaccctcctccagat
gacatcacacccatcgacctcggtttggttaaggtcactgctctgtttgtggcgcgctac
ggccaacagttttggcacgctttgatcgacatgcccatgtgcccccatttcagctttttg
aactcttctgacaagacattcagttactacaacggacttgttggtctgtatcatagagtc
ctaaggccttttcctcctgatgctgatgaagctcctcttggggagtttttccgctatgtt
cagttggagaagctgcatcagaaactcactgatttgcatgctttggcgtatggtcttgac
tgcatggacgaccgagatgcttctcctcttgccatgccaccctccttcttttcacttatg
actatgcctcatcatcctaatcaagatgaggatgacatccaaccccagtgtgaacctcat
cccattccaccatatatgtttcccgtaaggatttcactcgaagagctagttatcattaag
cttactgcactctttgtgtctcggtacggtcaatgttttcttcgggcgctgatgatgaga
gaggtttccaaccctcactttgactttctgtttttccgttgggatcaaaggcctcagttt
ccgtcaatggagccagctgaaatcaggtcccatgttttcaatgtgcttgtttatgcctat
tcaaaaatactaatgccttccaaaagggccaacgaccctggtttctgttcggtggtcgtt
cttgctgttttttcttcccgtcttcttcgacttgagaagccgaagctgggggagggagtg
aagactagggctatcattgatttgcatgcctttgtggcaggtgtggactatcttgctcac
atgcatgagccgcagtattctggtatcatgtcaccacctcaacgcctttcagttatgata
aagaacctgcagtcaccactacaaacgccgcatcctggtatacttgttctgcttcccctg
ggacgtaagctcagtgactaccctcaatgctcaaggtccatgtgtagccaccttgaatac
acatttcctcaatcgattggacccgatgagcttggtgttatcaagctcacagcgctgttt
gtaacaaggtatgggatgttttttatggaggctttgatgaagatagcgcctactgagttt
gagtttctgaagctaactcatagcaggagagcgctctttttcgcgtttattgacgtgtat
tccagtatattgaagcctttcacaaagggcggtgatcatttggccatggctcttgagttt
ttcttctactgtcttcagttgaataagcttaaaaagggagtggctgtgatggaattgtcg
gcttttttgagtggtgttgatcattttgcatggatggatgttaatggctactctgctatc
gtggctgcacctgaatgccgttcagtgatgatgaaccggctaacgcagattgatactggt
ggcggtcttgatcagcctccaactctaagaactcccttctcgtttccatctaactattat
ggattttcctcaccccgtgatattgctatcattaagctgacagctgtgtttgtggcacgg
tatggggtgcgcatttgtcgggaattgaagaagaaattggatgcaagaacagttttaaag
tttatggaaccaagtgatgaattgttccatttttatgaggtagctgttcatgcatattcc
aacatattagagggttcagatgatgctgatacagagacagttattgagagatacttccat
tgtgttcaatgggaggagcaaaaggaagaagggtcaatgacttttgatgatgatttgtat
ggttttgtggaggctgttgactgctttgctcagttggaggatggatacttttttcagatg
atggggaacatccatctagtacatccttgtgattgtctttatgatcagacctcttcatca
gagccaaagagacgaaaggttgacgagtcatctagtgttatagaggattcctcgacgatc
aaggtgtgggttccaacagtgtatggaaggaaagtcattaaaatagcagtggggtcgtta
tcggaaaaggtgtcgagtttgatggagaaaatagccaatgagattcaaatgccagcaaag
gatctgaagttacgtggcaaagaaggggtattgaagggggacaagtcactagcacaaaac
gatgttgaaacaggagaaatcctcaccctgacttggcgcatttctaggtggtattag

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