Brassica oleracea (wild cabbage): 106334822
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Entry
106334822 CDS
T04124
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106334822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106334822
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
106334822
Prokaryotic type
Archaeal type
TFB
106334822
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Ortholog
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GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Ribosomal_S27e
Cyclin_N
DUF7573
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
106334822
NCBI-ProteinID:
XP_013628652
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All DBs
Position
C3:24068523..24070949
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AA seq
316 aa
AA seq
DB search
MSDAFCSDCKKHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG
LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVIXLTKKICSVAN
GATKKEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVKK
SEEFDIRRSPISIAAAVIYIITQLSDEKKPLRDISVATGVAEGTIRNSYKDLYPHLPKII
PAWYAKEEDLKNLQSP
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcgttttgctcggactgcaagaaacacacggaggtcgtgttcgatcactcc
gccggagacaccgtctgctcggagtgcggcctcgtgctcgagtctcactcaatcgacgaa
acctccgagtggcgcaccttcgctaacgagtcgggcgataacgatcccgtccgcgtcggc
ggtccgacgaacccgcttctcgccgacggtggtctcaccaccgtcatttcgaaacctaac
ggatcgtccggggactttctctcgtcttcgcttggtcgttggcagaaccgtggatcgaac
cctgatcgcgggcttatcgtcgcgttcaagacgatcgctactatggctgataggttgggg
cttgtggcgaccatcaaggaccgagccaatgagatatataaaagggtagaggatcagaag
tcaagcagaggaaggaatcaggatgctcttttggctgcttgtttatacattgcttgtcgt
caagaggacaagccacgaactgtcatatagttaacaaagaaaatatgttctgttgccaat
ggagctactaagaaggagattggtcgtgcaaaagagtacatagtcaaacagttggggctt
gaaacaggacaatcagtagaaatgggaactatccacgctggagattttatgagacgtttt
tgctccaatcttggtatgactaaccaaaccgtgaaggcggctcaagaatctgtgaagaag
tcagaggagtttgatataaggaggagtcccatatcgattgcagcagcggttatatacatc
ataacacagctctctgatgagaagaagcctcttcgagatatctcggtggcaactggagtt
gcagaaggaactattaggaactcgtacaaagatctctaccctcaccttcccaagatcata
ccagcttggtacgctaaagaagaagatctcaagaaccttcaaagcccttga
DBGET
integrated database retrieval system
