Brassica oleracea (wild cabbage): 106334824
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Entry
106334824 CDS
T04124
Name
(RefSeq) branchpoint-bridging protein
KO
K13095
splicing factor 1
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106334824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106334824
Spliceosome [BR:
boe03041
]
Complex A
Other components
Complex A specific factors
106334824
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
zf-CCHC
eIF3g
RRM_5
KH_PNO1_2nd
PHD_4
RapA_C
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
106334824
NCBI-ProteinID:
XP_013628653
UniProt:
A0A0D3B3Z8
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All DBs
Position
C3:8666061..8669410
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AA seq
770 aa
AA seq
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MDSIELNNSNPSYHPLDQPPPPSSETVASSKDDNSASLAPDQIPAPEATSGSSNGDKNQS
EDTTTRRKRRSRWDPPPSESANNTTAEGGGGDSGTGTRKRKSRWADDEPKPTIQLPDFVK
EFGGGIEFDPEIQVLNSRLLDISRLLQSGMALDDRPEGQRSPSPEPVYDNMGIRINTREY
RARERLNRERQEIISQIIKKNPAFKPPADYRPPKLQKKLFIPMKDYPGYNFIGLIIGPRG
NTQKRMERETGAKIVIRGKGSMKEGRLQKKDMKYDPAENEDLHVLVEAETQEALDAAAGM
VEKLLQPVDEVLNEHKRQQLRELATLNGTIRDEEFCRLCGEPGHRQFACPSRLNTFKSDV
LCKICGDGGHPTIDCPVKDTTGKKMDDEYQNFLAELGGTLPESSLKQSSTTLALGAGSSG
SNPPWANNGGSGASAHPGLGSNPAKPSKEYDEKNLYIGFLPTMLEDDGLINLFSPFGEIV
MAKVIKDHVSGLSRGYGFVKYADFQMANSAIQAMNGYRLEGKTLAVRIAGKPAPPPGPPA
PPPPTQSYPPPPSQQYGAGGQLPNPSYSPAPVPWGPPVPSYSPYAPPPPPPGSYHTVPGQ
HMPPYGMHYPPPPPPPPHVTQAPPPGTSASESQQSFPPGVVQADSGTPPSSVPPNVYGSS
LGQPPYMSYPSYYTAVPPPPPPPVPTSSADHSQSMSNMPWASNPPVSSSDHSQGLGNAPW
APNPPMPPSVGYSQSMGNAPWAPKPPAQPPAENPSAVGDSEYEKFMAEMK
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggattccatcgaattgaacaattcgaatccttcttatcatcccctcgatcaacctcct
cctccttcctctgaaaccgtagcttcctccaaggatgacaactccgcttccctcgctccg
gatcagattccggctcccgaagctaccagcggctcttctaacggcgacaagaatcaatcc
gaggataccacgacccggaggaagcgtcggagcaggtgggatcctccgccttccgagtcg
gctaacaatactaccgccgaaggtggtggcggcgattccggtaccgggactaggaagcgt
aagtcgaggtgggcggacgatgagcctaagccgacgattcagcttcctgatttcgttaag
gaattcggtggaggtattgagttcgatcccgagattcaggttttgaatagtaggttgctt
gatatcagtaggctgcttcagtccggtatggctttggatgatagacccgaaggtcagagg
tctccttcgccagagcccgtgtatgataatatggggattaggattaacactagggagtac
agagcgagggagaggttgaatagagagaggcaagagattatatctcagatcatcaaaaag
aatcctgctttcaaacccccggcggattataggcctcccaagctccagaagaagctgttc
attccgatgaaggattatcccggttataatttcattggtcttattattggtcccaggggg
aatactcagaagagaatggagagggagactggtgctaagattgtgattaggggaaaaggg
tctatgaaagaaggtaggctgcagaagaaggatatgaaatacgaccctgcagagaatgag
gatttgcatgttttagtcgaggctgagactcaggaagctcttgatgctgctgctggtatg
gttgagaagctcctgcagcctgttgatgaggtgctgaatgaacacaagaggcagcagctt
agggagcttgctaccttgaatgggactataagggatgaagaattctgtaggctgtgtggt
gagccaggacataggcagtttgcttgtccgtctcgtttgaatacctttaaaagtgatgtg
ctttgcaagatttgtggtgatggtggacaccctactattgattgccctgtgaaggatacc
actgggaagaaaatggatgatgagtatcagaactttttggcagagttaggaggaactctc
cctgaatcttctcttaaacagagtagtactaccttggctctgggagcaggaagttccgga
agtaatcctccatgggctaacaatgggggcagtggggcaagtgcgcatcctggcttaggg
tcaaatccagccaaaccctccaaagaatatgatgaaaaaaacctgtacattgggttcttg
cctacgatgcttgaggacgatggtttgattaatcttttttcaccctttggtgaaattgtg
atggcaaaggtaatcaaggaccatgtttctggtctgagcagaggctatggttttgtgaag
tacgcagatttccagatggccaattcggcaatacaggcgatgaatggttatcggttagaa
ggtaaaacacttgctgtcaggattgctggtaaaccggcaccgcctcctgggccaccggca
cctccgccacctactcaatcttatcctcctccaccatcacaacaatatggcgctggtggg
caactgccaaatccttcatattcaccggctccagttccttggggtcctcctgttccttcc
tattctccatacgctcctccgcctcctcctcctggttcttaccatactgtccctggtcaa
catatgcctccttatggaatgcactacccaccaccaccaccaccacctcctcatgtgaca
caagctcctccgcctggcacttctgctagtgaaagccagcaaagcttcccgccaggagta
gtacaagcagacagtggtactcctccttcatctgtgccaccaaatgtctatggtagttcg
cttggacagcctccatatatgagttatccatcttattacactgctgttccacctccacca
cctcctccagtgccgacgtcgtctgctgatcattcccaaagcatgagtaacatgccatgg
gccagcaatcctcctgtgtcgtcatctgatcactcgcaaggtctaggtaatgcaccttgg
gcacctaaccctcctatgccaccttctgttggatactcgcagagcatgggcaacgctccc
tgggctcccaagcctccagcacagccacctgcagagaatccatctgctgttggagattct
gagtatgagaagttcatggctgagatgaagtag
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