Brassica oleracea (wild cabbage): 106334861
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Entry
106334861 CDS
T04124
Name
(RefSeq) LOW QUALITY PROTEIN: chaperonin 60 subunit beta 2, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106334861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106334861
03110 Chaperones and folding catalysts [BR:
boe03110
]
106334861
03029 Mitochondrial biogenesis [BR:
boe03029
]
106334861
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106334861
Enzymes [BR:
boe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
106334861
Messenger RNA biogenesis [BR:
boe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
106334861
Chaperones and folding catalysts [BR:
boe03110
]
Heat shock proteins
HSP60 / Chaperonin
106334861
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
106334861
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106334861
Exosomal proteins of other body fluids (saliva and urine)
106334861
Exosomal proteins of breast cancer cells
106334861
Exosomal proteins of colorectal cancer cells
106334861
Exosomal proteins of bladder cancer cells
106334861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
106334861
NCBI-ProteinID:
XP_013628698
LinkDB
All DBs
Position
C3:25353778..25357248
Genome browser
AA seq
596 aa
AA seq
DB search
MASIFTATSSLGSLVAPISPKLSSATSISSSSFGRRQNVCPRRPRPAIVCAAKELHFNKD
GSTIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAREVELEDPVENI
GAKLVRQAAEKANDLAGDGTTTSVVLAQVFIAEGVKVVAAGANPVLITRGIEKTAKALVH
ELKLMSKEVEDSELADVAAVSAGNNPEVGNMIAEAMSKVGRKGVVTLEEGKSVENHLYVV
EGMQFDRGYISPYLVTDSEKMSVEYENCKLLLVDKKVTNARYLVGVLEDAIRGGYPILII
AEDIEQEALATLVVNKLRGTLKIAAIKAPGFGERKXQYLDDIAILTGATVIREEVGLSLD
KAGKEVLGTASKVVLTKEMTTIVGDGSPQEAVNKRVVEIKNLIEQAEQEYEKEKLNERIA
KLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVAEGIVVGVGCTLLRLAAKVDAIK
DTLENDEEKVGAEIVKRALSYPLKLIAKNAGVNGSVVSEKVLANDNVKFGYNAATGKYED
LTAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDNSGYGY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgatattcactgctacatcttcacttggttccttggttgctcccatttccccc
aagctttcttctgcgacttctatctcttcaagctcatttggaaggagacagaatgtgtgc
ccaagaagaccccgtcctgcgattgtttgtgcagccaaggagttgcatttcaacaaagat
ggttccaccataaagaaacttcaaactggtgttaacaagctagccgaccttgttggtgtc
acacttggaccaaaagggagaaacgttgttcttgagagcaaatatggatctccaaaaatt
gttaatgatggtgtcactgttgctagagaggtcgagttggaggacccggttgagaacatt
ggtgcaaagcttgtgaggcaagcagctgaaaaggccaatgacttagctggtgacggtaca
acaacatctgttgttcttgcacaagtttttattgctgagggtgtcaaggtggtggctgca
ggtgcaaaccctgtgttaataactagaggcattgagaagacagcaaaggctttggttcac
gagctgaagctaatgtccaaggaggttgaagacagtgaacttgcggatgtggcggctgtt
agtgctggtaacaaccctgaagttggaaacatgattgctgaagcaatgagcaaagtgggc
aggaaaggtgttgtgacacttgaggagggtaaaagcgttgagaaccacctttacgtggtg
gaaggaatgcagtttgaccgtggctatatctccccatacttagttacagacagtgagaaa
atgtctgtggagtatgaaaattgcaagctgcttcttgttgacaagaaggttaccaatgca
aggtaccttgttggtgttctagaggatgctattagaggcggttatccaattctgataatt
gcagaagatattgaacaagaagctttggctactcttgttgttaacaagcttagaggcact
ttgaagatcgcagctattaaagctcctggatttggagagcggaagnagcagtaccttgat
gatattgccattctaactggagcgactgtgataagagaggaagttggtctctctcttgac
aaagctgggaaagaggttttaggtaccgcctctaaggttgttctcaccaaggagatgacg
accattgttggtgatggtagcccacaggaagcagtgaacaagcgtgttgtagagattaag
aatcttattgagcaagcagagcaagagtatgagaaggaaaaattgaatgagagaattgca
aagctttctggtggagttgctgttattcaggttggagcacaaactgagacagagctgaaa
gaaaagaagctgagagttgaagatgctcttaacgccacaaaggctgcggttgcggaaggt
attgttgttggtgttggttgcactctgcttcgtcttgcagccaaggttgacgccatcaag
gatacccttgaaaacgatgaagaaaaagttggagcagagatcgttaaaagagccctgagt
taccctctgaagttgatagcaaagaatgctggtgtcaacggaagcgttgttagcgagaag
gtgctagctaatgataatgtgaagttcggatacaatgctgcaaccggaaagtatgaagac
ctgacggctgcaggaatcattgaccctacaaaggttgtgagatgttgcttggaacatgcc
gcctcggttgcaaagacgttcttgatgtctgactgtgtggttgttgagatcaaggagcca
gagccagttcctgctggcaacccaatggacaattcaggatatggatactga
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