Brassica oleracea (wild cabbage): 106334878
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Entry
106334878 CDS
T04124
Name
(RefSeq) pre-mRNA-splicing factor SLU7-A-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106334878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106334878
Spliceosome [BR:
boe03041
]
Complex C
Other components
Step II factors
106334878
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slu7
Zn_ribbon_NUD
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
106334878
NCBI-ProteinID:
XP_013628718
UniProt:
A0A0D3BHC7
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Position
C3:complement(47399611..47401208)
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AA seq
523 aa
AA seq
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MATASGAFKSRANHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSKKP
SLKHQRNWKNDLNSKSTCYDRGAKMFQAEKYRKKACQNCGAMSHDVKSCMYRPRKVGAKF
TNMYIAPDEKVESLKLDYAAKRDRWNGYDTSDYHRVVERYEARENARKKYLKEQKIKKLE
ENDGDEDEDDDGLRVDEAKVDESKQMDFAKVEKRVRTSGGGSTGTVRNLRIREDTAKYLL
NLDVNSAHYDPKTRSMREDPLPNTDPNEKFYLGDNHYRNSGQALEFKQMNIHSWEAFDKG
QDTHMQAAPSQAELLYRNFKDAKAKLISQTKDSLMEKYGNASTEDDIPMEILLGQSERQV
EYDRSGRIIKGQEVILPKSRYEEDVYANNHTSVWGSWWKEQQWGYKCCKQTIRNSYCTGS
SGIDAAEASLDLMNANIVRTELRPNTVEEKRMATWGTDIPGDLELNKDVLSNALKKEDEL
KREEKDERKRKYNVKYNNDVTVEEMEAYRMKRAHHEDPMKEFL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcttcaggtgcttttaagtctagggcaaatcacaggaagcaaatagaatta
gaagaagctcgtaaagctgggcttgctccagcagaagtagatgaggatggaaaggaaatc
aatcctcacatacctcagtacatgtcctctgctccatggtatctcaactctaagaaaccg
agcttgaagcatcaaaggaactggaagaatgatctcaatagcaaaagtacatgctacgac
agaggcgcaaagatgtttcaagctgaaaaatacaggaagaaagcatgtcaaaactgtggt
gcaatgtctcatgatgtgaaatcatgtatgtatagacctcgtaaggtcggagccaaattc
acaaacatgtacattgcaccggatgagaaggtcgagagtctgaaactcgactatgctgcc
aagagggaccgatggaacggttatgatacttcagactaccaccgtgtggtagagcgctat
gaagcaagagagaatgcacgaaagaagtacctaaaggagcagaagattaagaaactagaa
gagaatgatggagacgaagatgaagacgacgacggcttaagagtggatgaagccaaggtt
gatgagagcaagcagatggactttgcaaaggtagaaaagcgtgttagaacaagtggtggt
ggtagcacaggaactgtaaggaatctacgtatcagggaagacactgccaagtatctattg
aaccttgatgtcaactcggctcactacgaccctaaaacaagatccatgcgtgaggacccg
cttccaaatacagatccgaatgagaaattttatttgggagataatcattatagaaacagt
gggcaggctctagagttcaaacagatgaacatccactcatgggaagcttttgacaaggga
caagacacgcatatgcaagcggctccatcccaagctgagttgctctacaggaactttaag
gatgctaaggccaaactgatatctcaaacaaaggactcacttatggagaagtatgggaat
gcttccacagaggatgacatccccatggagattttgcttgggcaaagcgaaagacaagta
gagtatgaccgttcagggaggattataaagggacaggaggtgatacttccaaagagcaga
tacgaagaagatgtttatgctaacaatcacactagtgtttggggctcatggtggaaagaa
cagcagtggggatataaatgttgcaagcaaaccattcgcaatagctactgtacaggttct
tctggaattgacgctgcagaggcttcccttgatctgatgaacgctaatattgttcgcact
gaattgagaccaaatacggttgaagagaagagaatggcaacgtggggaactgacatccct
ggtgatttggaattgaacaaggatgtactttctaatgctcttaaaaaggaggatgagctt
aagagagaagaaaaagatgagaggaaacgaaaatacaatgtcaaatacaacaatgatgtg
actgtggaagagatggaagcttataggatgaagagagctcaccacgaggatccaatgaaa
gagttcctctga
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