Brassica oleracea (wild cabbage): 106334892
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Entry
106334892 CDS
T04124
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106334892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106334892
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106334892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
106334892
NCBI-ProteinID:
XP_013628731
UniProt:
A0A0D3BIB8
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Position
C3:complement(50894001..50896274)
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AA seq
400 aa
AA seq
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MFGTPSSSPAFGTPSSTPLFGSSSTSAFGTPSSTPAFGTPSSTPAFGTPSATPAFGTPSS
TPAFGTPSTSSFASGGFGNSLFSTPFSSQQPQQQQQQQQQQTSPFQQPASTGFGFQSPFN
TAQQQTPFQNTQLTTQMAPVAPIPFSLADRDIQAIVEAYKEDPTNPKYAFKHLLFSVTEQ
QYRVKPAAVSDIMWAEAMSKLEGMDSSERERLWPQLVQGFKDLSQRLKLQDEVLVSDRER
IKTTQSNVKMLQRHLQAHTFPSIERLRQKEQNLQRRMLRVMRIVEGLEGKGFRLPLTKGE
AELSEKLTGITRQVKGPGAELSRRVQSLQTICRAQANSFSAGSSIYLPGSTKIDEQSLID
MQEVLQQETEAIGRLGNVLKRDMRDMEIMVAEDTEMTEDT
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcactccgtcttcttcgccggcgttcggcactccgtcgtccacgccgttgttc
ggttcctcctcaacctccgccttcggcactccttcgtctacccctgcgttcggtacgccg
tcgtccacgcccgccttcggaacgccctcagccacgccggccttcggcacgccttcatcc
acgccggcgttcgggacgccgtcgacatcttccttcgcctcgggcggatttggcaactcg
ctcttctccactccgttctcatctcagcagccacagcaacagcagcagcagcagcagcag
cagacgtcgccgttccagcagccggcgtctactggtttcggttttcagtcgccgttcaac
acggcgcagcagcagacgcctttccaaaatacgcaattgactactcagatggctcccgtt
gctcccattcctttctccctcgccgatcgtgatatccaggccatagttgaagcctataaa
gaagatccgacgaaccctaagtatgcgtttaagcatcttttgttcagtgtgactgaacag
cagtatcgtgtcaagcctgcagctgtatcagatataatgtgggcagaggccatgagcaaa
cttgaaggcatggattcatcagaaagagagcgcctttggcctcagcttgtgcaaggcttt
aaagatctttctcagcgccttaagcttcaagatgaagttctcgtatcagatagggaaaga
ataaaaactactcagagcaacgtgaaaatgcttcaaagacatttgcaagcacataccttt
ccgtctattgaaaggttgagacagaaggagcagaatcttcaaagacgcatgttgagggtg
atgaggatagtggagggcttagaggggaagggtttccggttacccttaacaaaaggagag
gccgaactgtctgagaagctaactggaataacaagacaggtgaaaggtcctggagcagag
ctttcaaggagggtgcaaagtctgcagacaatatgtcgcgctcaagcaaattccttctct
gctggtagctccatttatctcccggggtcaactaaaatagacgagcagagcctgattgac
atgcaggaggtattgcaacaggagacagaagccatagggaggctcgggaacgtattgaag
cgagacatgagggatatggaaatcatggtggctgaagatacagagatgaccgaggacaca
tag
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