Brassica oleracea (wild cabbage): 106334921
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Entry
106334921 CDS
T04124
Name
(RefSeq) protein transport protein Sec24-like At3g07100
KO
K14007
protein transport protein SEC24
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106334921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106334921
Membrane trafficking [BR:
boe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
106334921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
HVO_2753_ZBP
Motif
Other DBs
NCBI-GeneID:
106334921
NCBI-ProteinID:
XP_013628766
UniProt:
A0A0D3BA40
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All DBs
Position
C3:complement(23292675..23298093)
Genome browser
AA seq
1008 aa
AA seq
DB search
MNTENQGYPNFPARPPPFSSSPFASAPPPQSGGPESVGFRPPTRPFTPSGPPMAPPVGVM
RPFQPPLVSQIPGQGIRPPPPPPSFPSTAYGPPGGGSFQRFPTPPPPSGPPPTQTLAGHF
SPPMQPMGPPMQPMGPPMQPMGPPPQSMTSGVPGGYASPPGAGFQQSMPPVNPSYPGVGG
PQPSFPGYPSNQVTPVPFQSASQGPPSSYPPQTGGFSQHPGQQNLHPSYAPPTSNVQGLT
EDFNSLSLTNIPGSLEPGLDQASFPRPLDGDVDPNTFAEMYPMNCHSRYLRLTTSAIPSS
QSLASRWHLPLGAVVCPLAEAPEGEEVPLIDFGSSGIIRCRRCRTYVNPYVSFTDSGRKW
RCNICSMLNDVPGEYFSHLDATGRRMDMDQRPELTKGSVEIIAPTEYMVRPPMPPIYFFL
IDVSFSAAKSGMLEVAAQTIKSCLDNLPGYPRTQIGFITYDSTLHFYNMKSSLSQPQMMV
VSDLDDIFVPLPDDLLVNLSESRNVVEAFLDSLPLMFQNNVNVESAFGPALKAAYMVMNQ
LGGKLLIFQNSLPSLGVARLKLRGDDPRVYGTDKEYTLRVAEDNFYKQMAADCTKFQIGI
NVYAFSDKYTDIASLGTLAKYTGGQVYYYPGFQSSIHGDTLRHELARDLTRETAWESVMR
IRCGKGIRFSSYHGNFMLRSTDLLALPAVDCDKAYAMQLTLEETLLTTPTVYFQVALLYT
ASCGERRIRVHTAVAPVVTDLGEMYRQADTGSIVSVYTRLAIEKTLSGKLDDARNVIQQK
IVKALREYRNLHSVQHRLGSRLIYPESLKFLPLYGLAICKSTPLQGGPADTSLDERCAAG
LTMMALPVKKLLKLLYPNLFRVDEWLLKPSADLDDLKDVLRRLPLAAQSLDSRGLYIYDD
GFRLVLWFGRMLSPDIAKNLLGADFAAELSRVTLQEQENGMSKKLMRLIKKVRESDPSYH
PMCFLVRQGEQPREGFLLLRHLIEDQMGGSTSYVDWILQIHRQVQQNA
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgaatacggagaatcaaggttatccgaattttccagctaggcctcctccgttctcctcc
tctccattcgcatctgctccgccgcctcaatccggtggaccagagagtgttggatttagg
ccacctactagacctttcacaccttctggtcctcctatggctccaccagtgggtgtgatg
aggcctttccagcctcctttggtttctcagattccaggtcaagggattagacctccacct
ccaccgccttcgtttccttctacagcttatggtcctcctggtggcggctcttttcagcgg
tttccaactcctcctcctcctagtggtccaccaccaactcaaacgcttgcaggtcacttc
tcgcctccaatgcaaccaatggggcctccaatgcaaccaatggggcctccaatgcaacca
atggggcctccgccacaaagtatgacttctggggtacctggaggatatgcttctccccct
ggggctggttttcaacagtcaatgcctccagttaatccgtcgtatcctggtgttggtggt
ccacagccttcttttcctggttatcccagcaatcaggttaccccagtgccattccagtct
gcatctcaaggtcctccgtcatcatatcctcctcagacgggagggttttctcagcatcca
ggacagcagaacctgcatccaagctatgcacctccgaccagcaacgtacaaggcttaact
gaagatttcaattccctgtcccttacaaatattccgggatcgcttgagccaggacttgat
caagcctcgtttccaaggccattggatggtgacgtggacccaaatacgtttgctgaaatg
taccctatgaattgccattctagatatctacgtctgacaactagtgctataccaagttcc
cagtctctggcgtcgaggtggcatttacctctaggagctgtggtttgtcctcttgctgag
gctcctgaaggggaggaagtaccacttattgattttggatcaagtggcatcatccgctgc
agaagatgccgtacctatgtgaatccttatgtgagctttacagattctggaagaaagtgg
cggtgtaatatttgttctatgcttaatgatgtacctggtgaatacttctcacatttggat
gctactggccgaagaatggacatggatcaacggcctgagctgacaaagggcagtgttgaa
atcattgctccaacagaatacatggttcggcctccgatgccacccatctacttcttcctc
attgatgtttcattttcggctgctaaaagtgggatgcttgaggttgctgctcaaacgatt
aagtcttgtttggataacctgcctggttatcccagaactcaaattggatttattacttat
gacagcacgttacatttttacaacatgaagtcgtctttgagccagccgcaaatgatggtg
gtttcagatttagatgatatatttgtaccgttgccggatgatctcctggtcaatctatct
gaatcaagaaatgtggtggaagcctttttagacagcctgcctctgatgtttcaaaataat
gtcaatgtggaatcggcttttggtccagctctcaaagcggcgtacatggtcatgaaccaa
cttggtggcaagttgttaattttccagaactcgttaccttctctgggtgttgcgcgatta
aagttgcgcggagatgatcctcgtgtctatggaactgacaaagaatatactttaagggta
gcggaagacaacttctataagcaaatggctgccgattgtaccaagttccagataggaatt
aatgtttatgcattcagtgataagtacactgatattgcctccttagggactctggctaaa
tacactggaggacaggtgtactattatccaggcttccaatcatctattcatggagatacg
ttaagacacgaactggctagagaccttacaagggaaactgcttgggaatccgttatgcga
ataagatgtggaaaaggaattcgtttctcttcctaccatgggaacttcatgctaaggtct
actgacctgcttgctcttcctgctgttgactgtgacaaagcatatgcaatgcagctaact
ctggaagagacattgctaacaaccccgacggtgtatttccaagtcgctctactatatact
gcttcttgcggagagaggcgtataagggtacacacagctgttgcaccagtggttacagat
cttggagagatgtatagacaagcagacaccggttccattgtctctgtatatactagatta
gcaattgagaaaactttgtccggaaaattggatgatgcaagaaatgttatacaacaaaag
attgttaaagctctcagagagtatcggaatcttcactcggtgcagcatcggttggggtct
agattaatatacccagagtctctgaagttcttgccattgtacggactggcaatatgtaag
tccactcctcttcaaggtggacctgccgatacttcacttgacgagcgctgtgcggcaggc
ctcaccatgatggctctgcctgtcaaaaagctattgaagctgttatatcccaatttattc
cgtgttgacgagtggctcttaaagccatcagcagaccttgatgacctcaaggacgtacta
aggagattgcctctggctgctcagagtttggattctagaggactttacatttatgatgat
ggttttcggttggttttgtggtttggccggatgctttcacctgacattgctaaaaatctt
cttggagctgactttgcagcagagctctcaagggttacactgcaagagcaagagaatggg
atgtcgaagaagctaatgagactgataaagaaagtgagggagagtgatccatcatatcat
cccatgtgtttcctagtgaggcaaggagaacaaccccgagaaggcttccttctcctccga
catctcattgaggaccagatgggcggttcgactagttatgttgattggattcttcaaatt
caccgccaagtccaacaaaatgcgtga
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