Brassica oleracea (wild cabbage): 106334935
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Entry
106334935 CDS
T04124
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP65
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106334935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106334935
03110 Chaperones and folding catalysts [BR:
boe03110
]
106334935
04121 Ubiquitin system [BR:
boe04121
]
106334935
Enzymes [BR:
boe01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
106334935
Spliceosome [BR:
boe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
106334935
Complex C
U4/U6.U5 tri-SnRNP related factors
106334935
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
106334935
Chaperones and folding catalysts [BR:
boe03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
106334935
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
U-box type E3
106334935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
zf-NOSIP
Rtf2
U-box
zf-Nse
Motif
Other DBs
NCBI-GeneID:
106334935
NCBI-ProteinID:
XP_013628783
UniProt:
A0A0D3BEK4
LinkDB
All DBs
Position
C3:34856420..34859409
Genome browser
AA seq
597 aa
AA seq
DB search
MGKKQHSKDRMFITKTEWATEWGGAKSKENRTPFKSLPFYCCALTFLPFEDPVCTTDGSV
FELTTIVPYIRKFGKHPVTGAPLEGDDLIPLVFHKNSEGEFHCPVLNKVFTEFTHIVAVK
TTGNVFCYEAIKELNIKTKNWKELLTEEPFTRADLITIQNPNAVDSKITVEFDHVKNGLK
LEDEELKKMNSDPAYNINASGDIKHMLADLGTDKAKEIALHGGGGNKARNERAAAIAAIL
ESRSKIKESSKADEPKQTYSVVDAASASVHGRSAAAAKAGSSDKTAARIAMHMSGDRAPI
NTKMVKSRYSSGAASRSFTSTAFTPVTENDFELIKVEKNPKKKGYVQFRTTHGDLNIELH
CDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGKGGESIWGKPFKDEPNS
KLLHSGRGVVSMANSGPHTNGSQFFILYKSATHLNYKHTVFGGVVGGLSTLAAMESVPVD
ETDRPLEEIKIIEANVFVNPYTEPDEEEEEKEKAEKEKNEDKDIEKVGSWYSNPGSGTAE
GGAGTGGVGKYLKPKSNAATKDTSGATDSDIAATGVSKKRKTTSASASTGFKDFSGW
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagcagcacagcaaggatcggatgttcataacgaagacggagtgggcaacg
gaatggggaggcgctaaatccaaagagaatcgcactcctttcaagagccttcctttctac
tgctgcgcgcttacgtttctgccgttcgaggatcctgtgtgtacaaccgacggcagcgtt
ttcgagctaacaacgatagtgccttacattaggaagttcggtaaacatccagttacagga
gcgcctttggaaggagatgatcttattcctctcgtctttcacaagaactctgaaggagag
tttcattgtcctgttctcaacaaagtcttcactgagtttactcatattgttgctgttaag
accaccggaaacgtattctgctacgaggcaatcaaagagttgaatatcaaaaccaagaat
tggaaggagcttttaacagaggaaccattcacaagggctgaccttataactattcaaaat
cctaatgcagttgacagtaagataactgtggaatttgatcacgttaaaaacggccttaag
cttgaagatgaagaattgaagaagatgaactcagacccggcttataacataaacgcctct
ggagatatcaagcatatgcttgcagatcttggaactgacaaggccaaggagattgcttta
cacggtggaggtggaaacaaggcacgtaatgaaagagccgctgctattgctgccattctt
gagtcgaggtcgaaaatcaaagagagttctaaagcagacgaacctaagcagacttacagc
gttgtggatgccgcatccgcttcggttcatggaagaagtgctgctgcagctaaagctggg
tccagtgataaaacagctgcaagaatagctatgcatatgtctggagacagagcacctata
aatactaaaatggtgaagagccgttactcttcaggtgctgcttctcgttctttcacttcc
actgcgtttacacctgtaaccgaaaacgattttgaactaatcaaagtcgagaagaaccca
aagaagaaagggtatgttcagtttcgcacaacacatggagatttgaacattgagctccac
tgcgatatagctcctagagcatgtgagaatttcatcaccctttgtgaacgcgggtactac
aatggagtagcctttcacagaagcatcaggaacttcatgattcaaggtggcgatccaact
ggcacaggaaaaggaggtgaatccatttgggggaagccattcaaagacgagccaaactcg
aagctgctccactcgggaagaggcgtggttagtatggctaacagtggtcctcacacgaat
ggttctcagtttttcatcttatacaaatcagcaacccatttgaactacaagcacacagtg
tttggtggagttgttggtggtttgtcaacactagcagcaatggagagtgtacctgtggat
gaaaccgaccgtcctcttgaggagattaagataattgaggcaaatgtgtttgtaaatcca
tacacagaacctgatgaagaggaagaagagaaagagaaagctgagaaggagaagaacgaa
gacaaagacattgagaaggtcgggtcgtggtacagcaacccaggatcaggtacagcagaa
ggtggagccggtactggtggcgtcgggaaatacttgaaacctaagagtaatgcagccact
aaggacactagtggtgccacagactctgatattgcagccactggagtgtctaagaaaagg
aaaacaacttctgcttcagcctccacagggtttaaagatttctctggctggtag
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