Brassica oleracea (wild cabbage): 106335000
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Entry
106335000 CDS
T04124
Name
(RefSeq) ABC transporter F family member 1-like
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boe03009
]
106335000
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
106335000
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_22
AAA_15
RsgA_GTPase
MMR_HSR1
AAA_23
AAA_14
AAA_28
AAA_16
Zeta_toxin
AAA_30
ATP-synt_ab
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
106335000
NCBI-ProteinID:
XP_013628868
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All DBs
Position
C3:5612655..5615554
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AA seq
594 aa
AA seq
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MVSDASKKKALQKKAAAAAKRGGKAAAAKAAASSSNGADSLSSGVDALQISDRTCTGILC
SHPQSRDIRIESLSVTFHGYDLIVDSMLELNYGRRYGLLGLNGCGKSTLLTAIGLRELPI
PDHMDIYHLSHEIEATDMTSLEAVMSCDEERLKLEKEIETLVEQDDGGGERLDTIYERLE
AMDASTAEKRAAEILFGLGFDKEMQAKKTKDFSGGWRMRIALARALFIMPTILLLDEPTN
HLDLEACVWLEESLKNFDRILVVVSHSQDFLNGVCTNIIHMQSKQLKYYTGNFDQYCQTR
SELEENQMKQYRWEQEQISHMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVAR
DSVLVFRFADVGKLPPPVLQFVEVSFGYTPDYLIYKNIDFGVDLDSRVALVGPNGAGKST
LLKLMTGELQPTEGMVRRHNHLKIAQYHQHLAEKLDLEVPALIYMMNEFPGNEEEKMRAA
VGRFGLTGKAQVMPMKNLSDGQRSRVIFAWLAYKQPNMLLLDEPTNHLDIETIDSLAEAL
NEWDGGLVLVSHDFRLINQVAHEIWVCEKQCITKWNGDIMDFKKHLKAKAGLED
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccgacgctagcaagaagaaggctctccagaagaaagccgccgccgccgccaaa
agaggcggtaaagccgccgccgctaaagccgccgcctcttcttcaaacggagctgatagc
ttgtcgagcggcgtcgatgctcttcagatatccgaccggacctgtaccggaatcctctgc
tctcatcctcagtccagagatattcgtattgaatctctgtctgttacgtttcatggttac
gacctgattgttgattcgatgctggagcttaactacgggagacgctacggtctcctcggg
ctgaacggttgtgggaagtctactctcttaaccgcgattggactcagagagcttccgatt
cctgatcacatggacatctaccatctctcccacgagattgaagccaccgacatgacttct
ctcgaggctgtcatgagctgtgacgaggagaggttgaagctggagaaggagattgagact
cttgttgagcaggatgatggaggcggagagcgtcttgacacgatctatgagcggttagaa
gccatggatgcttcgacggcggagaagcgtgctgctgagattctgtttggtcttggtttc
gacaaggagatgcaggctaagaagactaaggacttttctggtgggtggaggatgaggatt
gcgttggcgagagctctcttcattatgcctactatccttttgcttgatgagcccacaaat
catttagatttggaagcttgtgtctggttagaggagagcctgaagaactttgaccgtatc
ctcgtcgtggtctcccactcgcaggattttttgaacggagtctgcaccaacatcatccac
atgcaaagcaagcagctaaagtactacaccggtaacttcgaccagtactgccagacacgt
tccgagctagaagagaatcagatgaaacagtacagatgggagcaggagcagatctcccac
atgaaggagtacatcgcccggttcggtcacggttcagccaaactcgcccgccaagcgcag
agcaaggagaagactttggccaagatggagagaggtgggctcacggagaaggtggcgaga
gacagtgtcctcgttttccgattcgccgacgtcggaaagcttccaccgccggtgcttcag
tttgtggaagtctcgtttgggtacactccggactaccttatatacaagaacatcgacttt
ggtgttgatttggactcgagggtggctcttgttgggcctaatggagctgggaagagtact
ctcttgaagctcatgactggcgagctgcaaccaactgaaggaatggtgaggcgtcacaac
cacttgaagattgctcagtaccatcagcatctagctgagaagctggaccttgaagtgcct
gcgcttatctacatgatgaacgagtttccgggtaacgaagaggagaagatgagagctgct
gttggtaggtttggtctgaccggtaaggcgcaagtgatgccgatgaagaatctgtctgat
gggcagaggagccgtgtgatattcgcgtggctggcttataagcagcctaacatgctttta
ctggatgagccgactaatcatttggatattgagacgattgattctcttgctgaggcgttg
aacgagtgggatggtggtttggttctggtgagtcacgacttcaggttgattaaccaagtg
gctcatgagatatgggtgtgtgagaagcagtgcatcactaaatggaatggtgatattatg
gacttcaagaagcatctcaaggctaaagctgggcttgaagactga
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