Brassica oleracea (wild cabbage): 106335002
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Entry
106335002 CDS
T04124
Name
(RefSeq) uncharacterized protein LOC106335002
KO
K08330
autophagy-related protein 11
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106335002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106335002
03029 Mitochondrial biogenesis [BR:
boe03029
]
106335002
Membrane trafficking [BR:
boe04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Scaffold protein
106335002
Mitophagy
Scaffold proteins
106335002
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106335002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
Rod_CreS
IKKbetaNEMObind
DUF8156
Ecotin
DUF3837
DUF745
Motif
Other DBs
NCBI-GeneID:
106335002
NCBI-ProteinID:
XP_013628870
UniProt:
A0A0D3BM50
LinkDB
All DBs
Position
C3:complement(61425048..61429744)
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AA seq
1135 aa
AA seq
DB search
MSSSFTDDGNGKLILCVAENGHSFEFECSEKTTSVESVMRFVESVSGIAFSDQLLLSLDM
RLEPQKLLSAFGLPSSDREVFVFNKSMLQSNSHPPSPEDVVDSQGVDDDHALPPASLHDH
HPLDDALDPALKALPLYERQFRYHFHRGRTFYNCTIVKHENCVRLTREQKVQQRAVEVAT
RNLEQYYRVIYHNFLEFMKRYKHQHRLHSDLLMNFERDIERLRSAKVHPCLLTDSRRCLL
DFVKEDNLKKAVENCASSHRQFENKIAQFQQMFVEVKRKVEELFACRASLSVKNLEATVK
DHERFIDEQKSILQSLSKDVNTVKKLVDDCMSSQMSSSLRPHDAVSALGPMYEVHDKNHL
PKMQACYNSISELLGFCKNKKNEMNSFVHSYMQKITYVTYIIKDAKLQFPVFREAMVRQD
DLFADLKLLRGVGPAYRACLAEAVRRKASMKLYMGMAGQLIEKLAMKRETEVRRREEFLK
THGPFVPRDVLASMGLYDTPTQCDVNVAPYDTSLINIEMADVDRYAPEYLVGLHSKFASS
RSSVGMSSDSETEEIGLDSFDDYLAASELVEIAGTSKMEVENAKLKADLASAISRICSLS
PQVEYEVLDESEAEKMLKIAAEKTAEALQAKDEYEKHLLSMLKEKQRRCDSYEKRIRELE
QRLNDDYLLGQRNINNNTDASGLKVTEYKAEASGDVEGNKAHVSGSEHMDEEGSCVSNLS
SKQPCKARERMDENMVDSSLVLSQPLDSSMLESQQNNEKGGKDNVMGEMGVFLSNSSTAE
SSPKSLNNNVATGVGLDTKQSDDIVLELRNELMEKSNKLSETESKLNGAMEEVASLSREL
GMNQKLLEESQMNCAHLENCLHEAREEAQTHLCAADRRASEYNTLRASSVKMRGLFERLR
SSVCAGGGVAGFAESLRTLAQALAKSINDNEDVGTVEFRKCIRVLADKVSILSKHWEESF
EKCRNLEATSDQARKDLGEKEELVKTLYTKHQLGKQANREKISFGRLEVHEIAAFVLNPA
GHYEAINRNCPTYYLSSESEALFTDHLPNRPTYIVGQIVHIERQAVKQQSPLSASASPEA
GKSDYLGSRTLASSSRSTSSSGTTPTNPYGLSSGCEYFIVTIALLPDTAIHLQAS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaagcttcactgatgatggcaatggcaagcttattctctgtgtggctgagaat
ggccactcttttgagtttgaatgcagcgagaagacgacttcagttgagtctgtgatgcgt
ttcgttgagtctgtctctggcattgccttctctgaccagcttcttctctcgctggacatg
agacttgagccgcagaagctgctctctgctttcggacttccatctagtgacagagaagtg
tttgttttcaacaagtctatgctgcaaagcaactctcatccgccatcaccggaagatgtg
gtagattcacagggagttgatgatgatcatgctttaccacctgcttcattgcatgatcat
catcccttggatgatgcgttagacccggctttaaaggctttacctttgtatgagaggcag
tttcgttaccatttccatagaggccgcaccttctacaactgtactattgtgaagcatgag
aactgcgtgaggttaacgagagagcagaaggtgcagcagcgggctgttgaagttgctacg
aggaatctggaacagtattacagggtgatctatcacaactttcttgagttcatgaagcgt
tataagcatcaacaccgcctccactctgatttgctgatgaattttgaaagggatatcgag
aggttgaggtcggctaaggttcacccttgtctgctaactgattcgaggagatgcttgctg
gactttgtcaaggaggataacctcaagaaggctgtggagaattgtgcaagctctcacagg
cagtttgagaataagattgctcagttccagcagatgtttgtggaggtcaagcgcaaggta
gaggagttgtttgcttgcagggcttctttatcggtgaagaacttagaagcgactgttaag
gatcacgaacgcttcatcgacgagcaaaagagcatattgcaatctctcagcaaagatgtc
aatacggttaagaagcttgtggatgattgcatgtctagccagatgtcctcgtctctccga
cctcatgatgctgtttcagccctgggtcctatgtacgaagtgcatgataagaaccacctt
cccaagatgcaggcttgttataactctatctctgaattgctgggtttctgcaagaacaag
aagaacgagatgaacagctttgtacacagctacatgcaaaagataacgtatgtcacatat
atcatcaaagatgctaagttacagtttcctgtttttagagaggcaatggtgcgtcaggat
gacttatttgcagacctgaagttactccgtggtgttggccctgcatatagagcctgcctg
gcagaggcggtgagaagaaaagcctctatgaagctgtacatgggaatggctgggcagttg
atagagaagcttgctatgaagagggaaacagaggtcaggagacgtgaggagtttctaaag
acgcatggtccctttgtacctcgtgacgtgttggcctcaatgggtttatatgatacgccc
actcagtgtgatgtcaatgtagctccttatgatacaagtttgatcaatattgaaatggct
gacgttgatcgatatgctcctgagtatctagttgggttacattcaaagtttgcatcctca
aggagttcagtgggcatgtctagtgatagtgagactgaggagataggtttagacagtttt
gatgattacctagcggcctctgaattagtggagatagctggaaccagcaagatggaagtt
gagaatgcaaaactgaaagctgacctcgcttctgcaatctctaggatttgttcattaagc
ccacaagttgaatatgaggtgctggatgaaagtgaagcagaaaagatgttgaaaattgcc
gcagagaagacagcagaggcgctgcaggccaaagatgagtatgagaaacatctcttatct
atgctcaaggaaaaacaaagacgttgtgattcatatgagaagcgaatccgtgaactggaa
caacgtctcaacgatgattatctactgggacagagaaatattaataataatacggatgcg
tctggcttgaaagttactgagtacaaagcagaagcttcaggtgacgtggaaggcaacaaa
gctcatgtatctggctcggagcacatggatgaggaaggctcatgtgtttcaaatctttct
agcaagcagccatgtaaggctcgggaacgtatggatgagaatatggtggattcctctctg
gtgctcagtcaaccgcttgattcatcaatgctggaaagccagcaaaataatgagaaaggt
ggaaaggataatgtgatgggggagatgggtgtgtttctaagtaacagctcgacagccgag
agctcaccaaaatctttgaataataatgtggcgactggcgtaggtttagataccaaacag
agtgatgatattgtcttggaacttagaaatgagctgatggagaagtccaataaactgagt
gagacagagtccaagctaaatggagctatggaagaggtagccagtctgagcagagagttg
ggaatgaatcagaagcttctcgaagaatcccagatgaactgtgcgcatttggagaactgc
ttacatgaagcaagagaagaagcccagacccatctctgcgctgctgatcgtcgagcttct
gagtacaatacacttcgcgcatcatctgtgaagatgcgaggcctctttgaaagactccga
agctccgtctgtgctggtggtggggttgctggttttgccgaatccttgcgtactttggct
caagctttagccaagtccattaatgacaatgaagatgtgggtactgttgagtttcggaaa
tgcatccgagtcctggcggacaaagttagtatcctctccaaacactgggaggaatctttt
gaaaagtgccggaatcttgaagctacaagtgaccaggcaaggaaggacttgggggaaaag
gaagagctggtgaaaacattgtacactaagcatcaacttgggaagcaggctaatagagaa
aagatatcattcggtcgtcttgaagtccatgagatagcagcatttgtgctgaatccagca
gggcattacgaggcgatcaacaggaactgcccaacctactacttgtcctctgaatccgag
gcactgttcacagatcacctcccaaaccggcctacatacatcgttggacagattgtccac
atcgagcgccaagcagtgaagcagcaatcaccgctttcagcttctgcatctccagaggcg
ggtaagtcggactatctcggctcaagaactctggcatcaagctcaaggtcaacatcatct
tcaggaacgacaccaacaaacccttatggtctctcttcaggatgtgaatacttcattgtg
acaatagcattgcttcctgacactgccattcatctacaagcttcctga
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