Brassica oleracea (wild cabbage): 106335076
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Entry
106335076 CDS
T04124
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106335076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106335076
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106335076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
106335076
NCBI-ProteinID:
XP_013628954
UniProt:
A0A0D3BA81
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All DBs
Position
C3:23503653..23507036
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AA seq
471 aa
AA seq
DB search
MQSDSGKLFIGGISWDTDEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA
ETVITEKHNIDGRLVEAKKAVPRDDQNTVTRSNSSSLQGSPGGRTRKIFVGGLPSSITES
DFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKR
AVPKELSPSPARSSPLGAGYGYGVSRVNNLLNGYAQGFSPGGYGLRMDGRFSPIGAGRSG
FASFGGSGYGQGLPAGFTGGSSFNGSVDYGRGMSPYYIGNTNRFGYEGGSGGGGNSSFFS
SNLWGNNGGRSYNNNAANSNSNTYMGGGSTSGNNTLNGPFGNWGAPGGGNSGVGNENLNF
GYGGNGESGFGLGGARNIGPPSKAAPSSSFSSASAGYDGAGLAEFYGNGAVYSDPTWRSS
APETEGPASFSYGIGGGGGGPSSDVSARSSSPGYVGSYSVNKRQPNRGIAT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcagacagtggaaagctcttcatcggcgggatatcgtgggacaccgatgaggaa
cgtctcaaggagtatttcagcagctttggtgaagtcatcgaagctgtgatcttgaaagat
cgcaccactggtcgtgcacgtggcttcggctttgtagtcttcgctgatccagctgttgcc
gagactgttataacggaaaaacataacattgatggaagattggttgaagccaagaaggct
gttcctagagacgaccaaaacacagtaacaagaagcaacagcagtagcctccaaggatca
ccaggaggtcggacaagaaagatctttgttggagggttaccttcttctatcacagagagc
gacttcaaaacctattttgagcagtttgggacgactaccgacgtggttgttatgtatgac
cacaacacgcaaaggcctagaggcttcggattcattacttatgactccgaggaggccgtt
gagaaagtgctgctcaagacgttccatgaactcaacggtaaaatggtcgaggtcaagcga
gctgttcctaaggagttgtctccgagtccagctcgcagcagcccgctcggtgctggctac
ggctatggggttagtagagtcaacaacctccttaatggatatgctcaagggtttagcccc
ggaggctatgggcttaggatggatggtaggtttagtcccattggtgctgggagaagcggg
tttgcgagtttcggtgggtctgggtatgggcaggggttgcccgcagggttcactggagga
tcaagtttcaatgggagcgtagactatgggagagggatgagcccttactatattggtaac
acgaaccggtttggttatgaaggaggcagtggaggaggggggaactcgtctttcttcagt
tcgaatctttggggaaacaatgggggtcgtagctataacaacaacgctgcaaactctaac
tccaatacatacatgggaggaggatcaacgagtgggaacaacacacttaacggtccattt
ggtaactggggtgctcctggaggagggaacagtggtgttggtaacgagaatttgaacttt
ggttatggaggaaacggtgaatctggttttgggttgggaggagcaaggaacatagggcct
cctagcaaggcagcaccatcgtcttcattctcttctgcctcggcgggttatgatggagca
ggacttgcagagttttatgggaatggtgcggtttatagtgatcccacgtggagatcatca
gctcctgagacagaagggcctgcttcttttagctatgggattggaggaggaggaggaggt
ccttcttcggatgtttcagctagaagttcatctccaggttatgttggtagttacagtgtg
aacaagagacaaccaaacagaggaattgctacttag
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