Brassica oleracea (wild cabbage): 106335088
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Entry
106335088 CDS
T04124
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03040
Spliceosome
boe04141
Protein processing in endoplasmic reticulum
boe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106335088
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106335088
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106335088
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
boe01009
]
106335088
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106335088
03009 Ribosome biogenesis [BR:
boe03009
]
106335088
03110 Chaperones and folding catalysts [BR:
boe03110
]
106335088
04131 Membrane trafficking [BR:
boe04131
]
106335088
03051 Proteasome [BR:
boe03051
]
106335088
03029 Mitochondrial biogenesis [BR:
boe03029
]
106335088
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106335088
Protein phosphatases and associated proteins [BR:
boe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
106335088
Spliceosome [BR:
boe03041
]
Complex B
Other components
Prp19 complex
106335088
Complex C
Prp19-CDC5 complex
106335088
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
106335088
Chaperones and folding catalysts [BR:
boe03110
]
Heat shock proteins
HSP70 / DNAK
106335088
Membrane trafficking [BR:
boe04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
106335088
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
106335088
Proteasome [BR:
boe03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
106335088
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
106335088
Exosome [BR:
boe04147
]
Exosomal proteins
Proteins found in most exosomes
106335088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
DACNG
Motif
Other DBs
NCBI-GeneID:
106335088
NCBI-ProteinID:
XP_013628965
UniProt:
A0A0D3BAZ0
LinkDB
All DBs
Position
C3:complement(24960930..24963426)
Genome browser
AA seq
650 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN
QVAMNPTNTVFDAKRLIGRRFSDPSVQADMRHWPFKVISGPAEKPMISVNYKGEEKQFSA
EEISSMVLTKMREIAEAYLGTSIKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEP
TAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKHKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
TTITRARFEELNMDLFRKCMEPVEKCLRDAKIDKSNVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILTGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKK
KVDAKNALENYAYNMRNTIKDEKIASKLEAADKKKIEDAIDQAIEWLDGNQLAEADEFED
KMKELESLCNPIIARMYQGGAGGDMGAGGMDDDVPAGGSGGAGPKIEEVD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtaaaggcgaaggtccagcaataggtatcgatctcggtactacctactcctgc
gtcggcgtgtggcagcatgaccgcgtcgagatcatcgccaacgatcaaggcaaccgcaca
actccttcctacgtggctttcaccgacagcgagcgtctcataggagatgctgcgaagaat
caagtcgctatgaaccctaccaacaccgtctttgatgctaagcgtcttattggcagaaga
ttcagcgacccctctgtgcaagcagacatgagacactggccattcaaggtcatctccggt
ccagccgagaagccaatgatcagcgtcaactacaagggagaagagaaacagttctccgca
gaagaaatctcctccatggtcctcaccaaaatgcgcgagatagcagaagcatacctcggc
acatccatcaaaaacgccgtcgtcacggtccccgcctacttcaacgactctcagcgtcaa
gccacaaaggacgctggagtcatctctggcctcaacgtgatgcgtatcatcaacgaacct
acagctgctgctattgcctacggtctcgacaagaaggcgtcgagcgttggtgagaagaac
gtgcttatattcgacttgggaggtgggactttcgatgtctctcttctcacgattgaggaa
gggatcttcgaagtgaaggcgacggctggtgacactcacctcggaggtgaggacttcgac
aacagaatggttaatcacttcgtccaagagtttaagaggaagcacaagaaggacatcacg
ggtaacccgagagctctccgcaggctgagaacagcctgcgagagagcgaagaggactctc
tcttccaccgcgcagactacgatagagattgactctctctacgaagggatcgacttctac
actactattactcgcgcgaggttcgaggagctcaacatggatctgttcagaaaatgtatg
gagccggtggagaagtgtctgagagacgctaagattgataagagcaacgtccacgacgtg
gtgctcgtcggcgggtccaccaggatccctaaagtgcagcagcttctccaagacttcttc
aacgggaaggagctttgtaagagtattaaccccgacgaggccgtcgcttacggcgcggcg
gtccaggctgcgatcttgaccggtgaagggaacgagaaggttcaagatttgctgcttctt
gacgtcactcctttgtcgttgggcttggagactgccggtggtgttatgacggttttgatc
cccaggaacacgacgattccgacaaagaaggagcagatcttctctacttactcggacaac
cagcctggtgtgttgatccaagtctacgaaggagagagagcgaggacaaaagacaacaat
cttttagggaagttcgagctcagcggcatccctcctgcgccgcgtggtgtccctcagatc
accgtctgtttcgacatcgacgctaacggcatcctcaacgtctcggcggaggataagact
actggacagaagaacaagattaccatcactaacgataaagggaggctgtcaaaggaggag
attgagaagatggtgcaagaagcggagaagtataaagctgaggatgaggagcataagaag
aaggttgatgccaagaatgcgttggagaactatgcgtacaatatgaggaacacgatcaag
gatgagaagattgcgtctaagcttgaggcggcggataagaagaagattgaggatgcgatt
gatcaggcgattgagtggttggatgggaaccagttggctgaggctgatgagtttgaggat
aagatgaaggagctggagtcgctttgtaatccgattattgcgaggatgtatcaaggtggt
gctggtggcgatatgggtgctggagggatggatgatgatgttcctgctggtggaagtggt
ggtgctggacctaagattgaagaagttgattaa
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