Brassica oleracea (wild cabbage): 106335185
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Entry
106335185 CDS
T04124
Name
(RefSeq) histone-binding protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03082
ATP-dependent chromatin remodeling
boe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106335185
03083 Polycomb repressive complex
106335185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
boe03036
]
106335185
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
106335185
Histone modification proteins
HAT complexes
HATB complex
106335185
HDAC complexes
Sin3A-HDAC complex
106335185
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
106335185
PRC2.2
106335185
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
106335185
Heterochromatin formation proteins
Other heterochromatin formation proteins
106335185
Chromatin remodeling factors
NuRD complex
106335185
NuRF complex
106335185
NuRF complex (fruit fly)
106335185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_EML
WD40_RFWD3
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
eIF2A
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_RIG_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
106335185
NCBI-ProteinID:
XP_013629089
LinkDB
All DBs
Position
C3:complement(6368858..6370816)
Genome browser
AA seq
424 aa
AA seq
DB search
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDRDEPPGKD
YSVQKMILGTHTSENEPNYLMIAQVQLPLDDTESEARQYDDERSEFGGFGCATGKVQIIQ
QINHEGEVNRARYMPQNPFVIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSSE
GYGLSWSKFKAGHLLSGSDDAQICLWDINATPKNKVIDAQQIFKAHEGVVEDVAWHMSHE
HLFGSVGDDQYLLIWDLRSPSASKPIQSVVAHSMEVNCLAFNPINEWVVATGSTDKTVKL
FDLRKLTSALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTAEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDAPGEEP
IKGS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagacgaagaggagatgcgaggagagatcgaggagcgtctaatcaacgaagag
tacaagatctggaaaaagaacactcctttcctctacgatctcgtcatcactcacgccctc
gagtggccttccctcaccgtcgaatggctccccgaccgcgacgagcctcccggcaaagac
tactccgtccagaagatgattctcggcacccacacttccgagaacgaacccaattacctc
atgatagctcaggttcagcttcccctcgacgacaccgagagcgaagctcgtcagtacgac
gacgaacgctctgagtttggtgggtttggctgcgccaccggaaaggttcaaattatccag
cagataaatcacgaaggggaggtgaaccgagctcggtacatgcctcagaacccttttgtg
attgctaccaagacggttaatgcggaggtgtatgtgtttgattacagcaagcacccatct
aagccgccgcttgatggagcttgcaaccctgatttgaggctgagaggtcacagctctgag
gggtatggtttgtcttggagtaagttcaaggcgggtcatttgcttagtgggtctgatgac
gctcagatctgcttgtgggatatcaacgctactcctaaaaacaaggtcattgatgctcag
cagatctttaaggctcatgaaggggtcgtggaagatgttgcatggcatatgagtcatgaa
cacctgtttggatccgttggagatgatcagtaccttcttatatgggatctgcgttctcca
tctgccagtaagccaatacagtctgtggttgctcactccatggaggttaactgtttagcc
ttcaatccaatcaatgagtgggttgtagcaacagggtcaactgataagactgttaaatta
ttcgatctacggaagcttaccagcgctcttcacacgtttgatagccataaagaggaggtt
ttccaagttggatggaacccgaagaacgagactatcttagcctcatgctgccttggtaga
aggcttatggtttgggaccttagcaggatcgacgaggagcagacagcagaggatgcagag
gacggtccaccggagctgctgtttatccatggcggccacaccagcaaaatatcagatttc
tcgtggaacccatgtgaagattgggttatttccagtgtagctgaggacaacatactccaa
atatggcaaatggctgagaacatttatcatgacgaggatgatgctccaggggaagaacca
ataaaaggttcttag
DBGET
integrated database retrieval system