Brassica oleracea (wild cabbage): 106335298
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Entry
106335298 CDS
T04124
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
boe01002
]
106335298
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106335298
Enzymes [BR:
boe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106335298
Peptidases and inhibitors [BR:
boe01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106335298
Ubiquitin system [BR:
boe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106335298
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
SCO1756_N
Motif
Other DBs
NCBI-GeneID:
106335298
NCBI-ProteinID:
XP_013629231
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All DBs
Position
C3:6422523..6426259
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AA seq
814 aa
AA seq
DB search
MEASSNGSCAVSSVFRKIEFHPARKPFNGFSNGKSDFKIETLNPSSSSASKQAFFSSPSF
KKRDGSDLLENGLDRELTFNRTIRKIGAGLENLGNTCFLNSVLQCLTYTEPLAAYLHDVG
HEKRCHVAGFCALCAMQKHVRNALQATGKILAPKYLVSNLRCVSRNFRNCRQEDAHEYMV
NLLECMHKCSLPSGVSSESSDAYRSSLVHKIFGGSLRSRVKCAQCSHSSDKFDPFLDLSL
DISKADSLQRALTRFTAVELLDDGAKVYQCERCKQKVKATKELTVFKAPYVLTVHLKRFE
AHRSEKIDKKVEFASAVDMKPFVSGPCEGNLKYTLYGVLVHYGRSIHSGHYACFVRTSSG
MWYSLDDNRVLQVSEKNVFNQKAYMLFYVRDRQNTAPKNVVPMVKKESLPTARASMIISS
NGNDQVSGSTVMKASILNGLGANGRAPLRSCDQGAPAVFNRKDLNAKETQKDPPSSVEAK
EILKRENGLSATAVLSQKDSNARENLQKELPISQANGERSLVKEKIKAPCATLPGKAAPL
LDGSRNAQILVNLPTSVANKDEETLTTPRKTRKGKTKTLQVGLKLFKLALGVRKKMKQKR
GRSSAVKVIPEELRSKKGATDQERSTSEITSEVASGSSCLPGKDNIVSVHNERRRNSNGN
MLLGSATGDLKERTNENGAVLASDQKPPLRSSDLSKASQIAKRKRESSKDEQIVLQKDEP
TVLTRGLPETVVAKWDEEVSASKKMGMNEGTRIGYVADEWDEEYDRGKKKKIRIKEEMYK
GPNPFQMIASKKQQTDTKKKWTQRMNTAKTGFRI
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggaggcttcgagtaacggatcctgcgccgtttcgtccgtctttagaaagatcgagttt
caccccgcgaggaagcccttcaatggcttctctaacggtaaatccgatttcaagatcgag
actttgaatcccagctcctcctctgccagcaagcaagccttcttctcctcaccgtccttt
aagaagcgagacgggtctgatctgttggagaatggattagatcgggagcttacttttaat
agaacgatccgcaaaatcggtgctggtttggagaatctcgggaatacatgttttcttaat
tcggtattacaatgtttgacatacacggagccattagctgcttacctgcatgatgttggc
catgagaaacgctgccacgtggctgggttttgtgctttatgtgcaatgcagaagcatgtg
aggaatgcccttcaagccactggcaaaatactagcaccgaaatatttggtctcaaacctg
cgatgcgtttcgagaaacttcagaaactgtcggcaggaagatgctcatgagtacatggtc
aatctcctagagtgcatgcacaagtgtagtctgccttctggtgtgtcaagcgaatcctct
gatgcttacaggagcagcttggttcacaaaatattcggtggtagcctccgtagtcgggtg
aaatgcgcgcaatgctcacatagctctgacaagtttgatccgtttcttgacttgagtcta
gacatttcgaaggcggattcgttgcagagagcgcttacgcgtttcactgctgttgagctt
ttagatgacggtgcaaaggtttaccagtgcgaaagatgcaagcagaaagttaaggctaca
aaagagctgactgtttttaaggcgccgtatgttctcactgtgcatctcaagcggtttgaa
gcgcatagatccgaaaagatcgacaagaaagtcgagtttgcgtctgcagttgacatgaaa
ccttttgtcagtggtccctgtgaaggtaatttaaagtacactctatatggtgtcttagtt
cattatggtcgaagtattcattctggtcactatgcgtgctttgttcgcacttcaagtggc
atgtggtactcccttgatgataacagagttttgcaagttagtgagaagaatgtgttcaat
cagaaggcgtatatgcttttctatgttcgtgatagacagaacacagccccaaagaatgtg
gttcccatggttaagaaagagagccttccgacagcaagagcttctatgattatatcttct
aacggaaatgatcaagtgagtggttcaacagtcatgaaagcatctattttgaacggtctt
ggtgccaatggtagagcacccttgagatcatgtgatcaaggtgctcctgctgtctttaac
cgaaaagatttgaatgccaaagagactcagaaggatcccccaagcagtgtagaggcaaaa
gagatcctgaagagggaaaatggtctaagtgctactgccgtcttatcccagaaagattca
aatgccagagagaaccttcagaaggaactgccaatatcacaggctaatggggaaagatct
ttggtaaaggagaagataaaggctccatgcgcgacactaccagggaaggctgcccctcta
ctggatggcagcagaaacgctcaaattcttgtgaacttgcctacttctgtagctaataaa
gatgaggagactctcaccacaccgagaaagactcgcaagggtaaaacaaaaaccctgcag
gtgggattaaaactttttaagctggcccttggcgtacgcaaaaagatgaaacagaaaagg
gggagatcaagtgctgttaaggttattcctgaggagctccgatccaagaaaggagctaca
gatcaagagcgttcaacttcagagataactagcgaagttgcttctggctcttcttgcttg
cctgggaaggataacattgtcagtgtccataatgaaagaagaaggaatagtaatgggaat
atgttgcttggctctgcgactggagatctcaaggagagaactaatgaaaatggtgccgtt
cttgcgtcagaccaaaaaccaccgttgaggagttctgacttatctaaagcaagccaaatc
gccaaaagaaagagagagtcgtcaaaagatgaacaaatcgtgttgcaaaaagatgagccg
acggttctcacgcggggtttgccggagacagttgttgccaaatgggatgaagaagtctcg
gcttctaagaagatgggaatgaatgaaggcaccagaatcggttatgtagcagatgagtgg
gatgaagaatatgatagagggaagaaaaagaagatacgaattaaagaagagatgtataaa
ggaccaaacccgttccagatgattgcttcaaagaaacaacaaaccgatacaaagaagaaa
tggacgcaacgcatgaataccgcaaagacaggcttccggatatga
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