Brassica oleracea (wild cabbage): 106335315
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Entry
106335315 CDS
T04124
Name
(RefSeq) nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106335315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boe03009
]
106335315
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
106335315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap
Nrap_D2
Nrap_D6
Laminin_II
Motif
Other DBs
NCBI-GeneID:
106335315
NCBI-ProteinID:
XP_013629261
UniProt:
A0A0D3BK01
LinkDB
All DBs
Position
C3:complement(55230325..55236405)
Genome browser
AA seq
1048 aa
AA seq
DB search
MEVDTVTDSRIQKVNSLLKDIRIDYDSLSKPVDSFVSSIREAIDAIPEGFKVTSELAPSF
VRDIGADKVEFTFKKPNGFNLCGSYSTRCMAKPDASVDLLLHLPKECFYEKDYMNHRYHA
KRCLYLCVLKKHLLASSSVEKVEWSTLQNEARKPVLVVFPVKKVDNFPGFSIRIIPSATS
LFDVAKLSMSRNNVRSVTADGVAQPTPTYNSSILEDMFLEENSELLKKTFSVWKELGDAL
ILLKIWARQRSSIYVHDCLNGFLISVILSYLATHGKINKSLNALDIFRVTLDFIATSKLW
ERGLFFPPQSESPVSKEEKLQFKELFPVVICDSSTLMNLAFRMTSVGFHELRDEASSTLK
CMKLRDGGFEEAFMTKIDYPVKYDHCIRLHLKGKTAMSTSGFCLDKEYWRTYEQKVHSLL
EQGLGDRAKSIRVVWRNTNQDSYVESGLSVLNREPLFIGISISSIENAFRTVDIGPDAEN
KTEALKFRKFWGEKSELRRFKDGRIAESTVWGTQQWTRHLIMKQIVEYILKRHLSLSSDD
IVQLVDQLDFSLIYGYKDPISTSGNLLEAFEVFSKCLRGIKGIPLKVSSVQPLDSALRLT
SVFPPEPHPLACGKIDAQRLQRVIPSCIPTMEVMIQLEGSGNWPMDDLAIEKTKTAFLIQ
IAENLQTIKGIRSTATENNVDVFMRGYAFRLRILHERGLSLVKREIGPDPVKHVSSADKM
LFIRSQHASMINGLHGRFPIYASVARLAKRWVSAHLFSGCLAEEAIELLVAHVFLTPLPL
GVPSSRINGFLRFLRLLADYDWMFYPLIVDINNDFGRNDEKEINDNFMSSRKGYEEDKQN
ISSAMFLAAPYDKASEAWTSLSPNLSELKRLVAYARSSANVLSKLVLQEHNDSVQWECLF
RTPLNNYDAVVLLHREKIPYPHHLLFPSELNQGKHVARGKASKAFNPFLLPGDLKRSPEE
LKKKLMVDFEPTKCFMSGLQEEFGTLKAWYDHIGGDAIGLTWTKHNSKKRERDEEEVEIN
PIEMLKAVGEMGKGLVRDIYLLKSPRFL
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggaggtagatacagtgacagactctcgtatccagaaagtcaacagcttgctaaaagac
attcgcatagattacgattctctcagcaagcccgtagacagtttcgtttcttcgattaga
gaagccattgacgcaatccccgaaggtttcaaggttacttcagagctagctcccagcttc
gttagagacattggagctgataaggtggagttcactttcaagaagccaaatggtttcaat
ctctgtggaagttactccactcgttgtatggcgaagccggatgcttctgttgatcttctt
ctccacttgcctaaggaatgtttctatgagaaagattacatgaatcatcgataccatgcc
aagagatgtctatatctttgtgtacttaagaagcatttgttggcgtcatcgtccgttgag
aaggttgaatggtcaaccttacagaacgaggctaggaagccagtgttagttgttttccct
gttaagaaagttgataactttcctggattctccataagaataatcccttcagcgacatca
ctgtttgatgttgcaaagctgagtatgagcagaaacaacgtccgttctgtaactgcggat
ggtgtcgctcagcccacgccgacttacaactcaagcatattggaggacatgtttcttgag
gaaaactctgagcttctcaagaaaactttctctgtgtggaaggagttgggagatgctttg
atattgctgaagatatgggctagacaaaggagctcgatatacgtccatgattgcctgaat
ggatttttaatctctgtgatactatcctaccttgctacacatggcaaaattaacaagtca
ctaaatgcattggacatattcagggtgacactggattttatagccacttctaaattatgg
gaaaggggtctgtttttcccaccacagagtgaaagccctgtctcgaaggaggagaaactg
caattcaaagagttgttccctgttgttatatgtgattcatctacacttatgaatttggct
ttccggatgaccagtgttggattccacgagctccgagatgaggcttcttcgacgcttaaa
tgtatgaaactcagagatggaggattcgaagaggcttttatgactaagatcgactatcct
gttaaatatgaccattgcataaggttacacctaaaagggaaaacagcaatgtctacatca
gggttttgtttggacaaggaatattggagaacctatgagcagaaagtgcatagccttctg
gaacaaggactgggtgacagagctaaatcaatccgcgttgtttggagaaataccaatcaa
gattcatatgtggagagtggcttgtcagttctcaacagagaaccactttttattggcata
tcaatcagctctatcgaaaatgcttttagaacggttgatatcgggccagatgctgaaaac
aagacagaggcactcaagttccgaaagttttggggagagaagtctgagctaaggaggttt
aaagatggaagaatagcggaaagcacagtctgggggactcagcagtggacaaggcatctt
attatgaaacaaattgttgaatatatcttaaagcggcatctttcactctcgtccgatgac
attgtacaattagttgatcaacttgacttctctctgatctacgggtataaagatccaata
tctacatctggaaatttgcttgaagccttcgaagttttctctaagtgcttgcgtgggatc
aaaggcatacctctaaaagtttctagcgttcagcctttagattcagctctcaggctcaca
tctgtgttccctcctgaaccccacccactggcttgtggaaaaattgatgcgcaaagacta
cagagagttataccatcttgcataccaacaatggaggtcatgattcagctagaagggtct
ggtaactggcccatggatgatttggcaattgagaaaacgaaaactgctttccttattcaa
attgcagagaaccttcagaccattaagggaataaggtccacagctactgagaataacgtc
gatgtgttcatgcgtggttacgcatttcgcctgagaatcttgcatgaaagaggcctcagt
ttggtgaagagagaaattggacctgacccggtgaagcatgtttcctctgccgataaaatg
cttttcattcgcagtcaacatgcaagcatgatcaatggtttgcatggccgattccctata
tatgcatcagttgcaaggctggcgaaaagatgggtttctgcgcatctcttttctggttgc
ctggcagaagaggccattgaacttttggttgcacatgtcttcctcacacctctcccactt
ggtgttccttcctctcgcatcaatggatttttaaggttcttgcggttattagcagactat
gactggatgttctatccgttgattgttgacataaacaatgacttcggcagaaatgacgag
aaggagatcaatgataacttcatgtcaagtagaaagggctatgaagaggacaaacaaaac
ataagttcagctatgttcttggcagctccttacgataaggcatcagaggcatggacatca
ctttcaccaaacttgtcggaactaaaaagattggtggcttatgctcgaagcagtgcaaac
gtattaagtaagctggtactgcaagaacacaatgattctgttcaatgggagtgtcttttc
agaacacctttgaacaactatgacgcagttgttcttctccatagagaaaaaataccttac
ccacatcatcttttgtttccgtcggaacttaaccaagggaaacatgtagcacgtggaaag
gcgagtaaagcgttcaacccgtttttattgcctggagatttgaagagaagccctgaggag
cttaaaaagaagttaatggtggacttcgagccgaccaagtgcttcatgagtgggttgcag
gaagagtttggaacgctgaaggcgtggtatgatcatataggaggcgacgctattggttta
acttggactaaacacaattcaaagaaacgagaacgagatgaggaggaagtggaaattaat
ccaatagagatgttgaaggcggtaggcgagatgggtaaagggttggtgagagatatctac
ttgctcaagtctcctcgctttctctaa
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integrated database retrieval system
