Brassica oleracea (wild cabbage): 106335380
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Entry
106335380 CDS
T04124
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106335380
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
boe01002
]
106335380
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106335380
Enzymes [BR:
boe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106335380
Peptidases and inhibitors [BR:
boe01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106335380
Ubiquitin system [BR:
boe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106335380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
UCH_1
MATH
ubiquitin
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
106335380
NCBI-ProteinID:
XP_013629344
UniProt:
A0A0D3BAV5
LinkDB
All DBs
Position
C3:complement(24803656..24812371)
Genome browser
AA seq
1111 aa
AA seq
DB search
MTMITPPPLDQQEDVEMLVPHSDVVEGPQPMEVAQLEAAAAVENPPAEEPPSVKFTWLIP
GFTRLNTRKHYSDVFVAGGYKWRVLIFPKGNNVDHLAMYLDVADAASLPYGWCRYSHFGL
TVVNQINNRYSVRKETQHQFNARESDWGFTSFMPLGELYDPTRGYLVNDTVLIEAEVSVR
KVLDYWAYDSKKETGFVGLKNQGATCYMNSLLETLYHIPYFRKAVYHMPTTENDAPTASI
PLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV
EGTIQKLFEGHQMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGD
NKYHAEGHDLQDAKKGVLFMDFPPVLQLQLKRFEYDFMRDIMVKINDRYEFPLQLDLDRE
NGKYLSPDADKSVRNLYTLHSVLVHSGGVNGGHYYAYIRPTLSDQWYKFDDERVTKEDVN
RVLEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDVAEHL
RVRLKKEQEEKEDKRKYKAEAHLFTTVKVARDEDITEQIGKNMYFDLVDHEKVKSFRIEK
QTPFLLFKEEVAKEFGVPVELQRFWIWAKRQNHTYRPNRPLLSHEELQMVGHIREASNKA
NNAELKLFLEIVRGPDERPIPPPAKSFEDILLFFKLYDPENGVLRYVGRLMVKNSSKPMD
IIGELIQMAGFAPDEEIELFEEIKFQPCVMCEHLDKNTSFKLSQIEDGDIICYQKALSIQ
ENECPYPDVPSFLEYVQNREVVRFRTLEKPKDDQFTMELSKLHSYDDVVDRLAEKIGLDD
SSKIRLTPHNCYSQQPKPQPIKYRGVDHLSDMLAHYNQTSDILYYEVLDIPLPELQGLKI
LNVAFHHASKDEVIIHTIRLPKQSTVGDVINELKTKVELSHQDAELRLLEVFSHKIYKTF
VSTERIESINDHYWTLLAEEIPEEEKNIGPNARLIHVYHFTKESGQNQQVHNFGDPFVLV
IHEGETLEEIKTRIQKKLHVPDEDFAKWKFAFFSTGRPDYLQDTDVVYNRFQRKDVYGAW
EQYLGLEHVDNAPKRAYHNRHAYEKPVKIYN
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgactatgataaccccgccgccgctcgatcagcaagaggacgtggagatgctggttccg
cattctgatgtagtcgagggacctcagcccatggaagttgctcaactcgaggctgctgct
gctgtggagaatccgccagcggaggaacctccctctgtgaagttcacgtggcttatccca
ggtttcacgaggctgaacaccaggaagcactactctgatgtttttgttgctggaggttat
aaatggcgagtattgatttttccgaaaggaaacaatgtggaccatttggccatgtacttg
gatgttgctgacgctgcgagtttgccatacgggtggtgtaggtattcacatttcggcctg
actgtagtgaatcaaatcaacaacagatattccgtgagaaaagagacccaacatcaattc
aatgcaagagaaagcgattgggggtttacatcattcatgcctctcggcgagctctacgat
cccactcgtggatatttggttaatgatactgttctgattgaagctgaagtttctgtgcgg
aaggttcttgattactgggcatatgactcaaaaaaagagacgggttttgttggacttaag
aaccaaggtgctacctgttacatgaattctctcctggagaccttgtaccacataccctac
ttcagaaaggctgtttaccatatgccaacaactgagaatgatgcacctacggcgagcatc
ccattggcgctccagagtttgttttacaaacttcagtataatgacaccagtgtagcgaca
aaggagctgacaaagtcgtttggctgggatacatatgattcgttcatgcaacatgatgtt
caagaactcaaccgagttctctgtgaaaagctcgaggacaaaatgaagggaactgttgtg
gagggaacaatacagaagttatttgagggtcaccaaatgaattacattgagtgcattaat
gtagattacaaatccactcggaaagaatcattctatgacctccagcttgatgttaaaggc
tgcaaagatgtatatgcttcttttgacaagtatgttgaagttgaacgccttgaaggagac
aacaaataccatgcagaaggacatgatttgcaggatgcaaaaaaaggtgttctgtttatg
gactttccacccgtacttcaacttcagctcaagaggtttgaatatgattttatgcgagac
ataatggtgaagataaatgatcgatacgagtttcctcttcaactggatctcgaccgagag
aatggaaaatatttatcccctgatgctgacaagagtgtccgtaacctctatacactccat
agtgtcctagttcatagtggtggagttaatggagggcactattatgcttatatcagacca
acactctcagaccagtggtataaatttgatgatgaacgggtgacaaaggaagatgtgaat
agggtactggaagagcaatatggtggcgaagaagagttaccacagaataatcctggtttc
aacaatccaccttttaaattcacaaagtactcgaacgcatacatgcttgtttatatccgg
gaaagcgacaaggataaaataatatgcaacgttgatgaaaaagacgtcgccgaacattta
cgggtgaggctgaaaaaagaacaagaagagaaagaagataaaagaaaatacaaggctgaa
gctcaccttttcacgacagtcaaggtcgcaagagatgaagacatcacagagcaaattgga
aagaatatgtactttgatcttgttgatcatgaaaaagtcaagagttttcgaatcgagaaa
cagaccccctttctgctttttaaggaagaggtggccaaagaatttggtgtccctgttgag
ctgcagcggttctggatttgggcaaagcggcaaaaccatacttatcgtcccaaccgcccc
ttgttatcccatgaagaattacagatggttggacatataagagaggcatcaaacaaggca
aacaatgctgagctaaagctgtttctggaaattgtgcgtggaccggatgagcgtcctatt
cctcccccagccaagtcatttgaagatattcttcttttctttaagctctatgaccctgag
aatggagtactaagatatgttggcaggctcatggtgaaaaactccagtaagcccatggat
ataataggggaattgattcaaatggctggctttgctcctgatgaggaaatagaacttttt
gaggaaataaagtttcaaccttgtgtaatgtgcgaacatctggataagaatacgtctttt
aaactatctcaaattgaagatggtgatatcatttgctatcagaaagctctttctatccag
gagaatgaatgtccatacccggatgtgccatcgtttttggagtatgtacagaatcgagag
gtggtgcgttttcgtactctggaaaaaccaaaagatgatcagtttactatggagttgtca
aagttgcactcatatgacgatgttgtggatagattggctgagaagattggccttgatgat
tcatcgaaaattaggcttactcctcacaattgctactcccagcaacccaagcctcagcct
attaaataccgtggagttgaccatctatcagacatgttagctcactataatcagacgtct
gacattttgtattacgaagttttggacattcctctaccagaattgcaaggtcttaagatt
ctaaatgtagcttttcatcatgcttcaaaggacgaagtgataattcacactatcagactg
cctaagcagagtactgtgggagatgttattaacgagcttaaaacaaaggtggagctttca
catcaagatgcagaattgaggttgcttgaggtgttttcccacaaaatctacaagaccttt
gtatctaccgaaagaattgagagtatcaatgaccattactggactttactagcagaggag
atacctgaggaagagaagaatattggtcccaatgctcggttaatccatgtgtaccatttt
actaaagagtctggacaaaatcagcaagttcataatttcggggaccccttcgttttggtg
atccacgaaggtgaaactttggaagaaatcaagacccgcatccaaaagaaacttcatgta
cctgatgaggactttgccaagtggaagtttgcttttttctcaacgggacgccccgactac
ttgcaggacacagatgttgtttacaatcgctttcagagaaaggatgtatatggtgcgtgg
gagcagtatcttgggttggagcacgttgataatgctcctaaaagggcttatcataaccgg
cacgcatatgagaagccggtgaaaatatataattag
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integrated database retrieval system
