Brassica oleracea (wild cabbage): 106335409
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Entry
106335409 CDS
T04124
Name
(RefSeq) threonine--tRNA ligase, chloroplastic/mitochondrial 2
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106335409
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
boe01007
]
106335409
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106335409
Enzymes [BR:
boe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
106335409
Amino acid related enzymes [BR:
boe01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
106335409
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
106335409
Prokaryotic type
106335409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
RPA_interact_M
Motif
Other DBs
NCBI-GeneID:
106335409
NCBI-ProteinID:
XP_013629381
UniProt:
A0A0D3BDF2
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All DBs
Position
C3:complement(31698397..31701651)
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AA seq
652 aa
AA seq
DB search
MASSRSLLISSSFLSKPSSFTSSLRRFVYLPSPTPRFYPKRHGFSTVFSVATEPAAISST
APKKSEPATVPLPSNDSSDKLLKIRHTCAHVMAMAVQKLFPDAKVTIGPWIDNGFYYDFD
MEPLTDKDLKRIKKEMDRIISRNLPLLREEVTREEAQKRIMAINEPYKMEILESIKEEPI
TVYHIGNEWWDLCAGPHVETTGKINKKAVELESVAGAYWRGDEKRQMLQRIYGTAWESEE
QLKAYLHFKEEAKRRDHRRIGQDLDLFSIQDEAGGGLVFWHPKGAIVRNIIEDSWKKMHV
EHGYDLIYTPHVAKADLWKISGHLDFYRENMYDQMEIEDELYQLRPMNCPYHILLYQRKR
QSYRDLPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLTE
EILSRFGFDKYEVNLSTRPEKSVGSDDIWEKATCALKDALDDKGWSYEVDEGGGAFYGPK
IDLKIEDALGRKWQCSTIQVDFNLPQRFDITYVDTNSDKKRPIMIHRAVLGSLERFFGVL
IEHYAGDFPLWLSPVQVRVLPVTDNQLEFCKEVSKKLKACGVRAELCHGERLPKLIRNAE
TQKIPLMAVVGPKEVETGTVTVRSRFGGELGTIPVDDFINKINIAVETRTAL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttctcgttctcttctcatttcctcttccttcctctccaaaccctcttccttc
acttcttctctaagacgcttcgtttaccttccctctcccacccccagattctatccaaaa
cgtcatggtttctccaccgtcttctccgtcgccaccgagccagcagctatctccagcacc
gcccccaagaagtcagagccagcgaccgtcccgcttcccagtaacgactcatccgacaag
ctcctcaaaattcgtcacacgtgtgcacatgtgatggccatggcagttcagaaactcttc
cctgatgctaaagtaacaataggtccctggattgacaacggtttctactacgatttcgac
atggaacctctgacagacaaagacctcaagaggatcaagaaagagatggatcgtatcatt
agtcggaacttaccacttctacgagaagaagtaactagagaagaagcgcagaaaaggatc
atggccatcaacgagccttacaagatggagattctcgagagtatcaaagaagagcccatc
accgtttaccatataggtaacgaatggtgggatctttgcgctggacctcacgtcgaaacc
acagggaagatcaacaagaaagccgtcgagctagaatccgtcgctggcgcgtactggaga
ggagacgagaagagacaaatgcttcagaggatctacggaacggcttgggagagcgaagag
cagctaaaagcgtatctccacttcaaggaagaagctaaacggagagaccacagacgcatt
ggccaagacctcgacctgttctcgatccaggacgaagctggaggagggttagtgttctgg
catcccaaaggcgccatcgttagaaacataatcgaagattcttggaagaagatgcacgtc
gaacacggttatgatctgatctacactcctcacgtcgctaaagctgatctgtggaagatc
agtggtcacttggacttctacagagagaacatgtacgatcagatggagatcgaagacgag
ctttatcagcttcgccccatgaattgcccttaccacatcttgctttaccaaagaaaacgt
cagtcatacagagatttgcccataagagttgcggagctcggtacagtttacagatacgag
ctgtctggtagcttgcacggtctcttccgtgtcagagggttcacacaggacgatgcgcat
atattttgtttagaggatcagatcaaagacgagatcagaggtgtgttggatctcacggaa
gagatattgtcgaggtttgggttcgataagtatgaagtgaacttatcaacaagacctgaa
aaatcagttgggagtgatgatatatgggagaaggcaacgtgtgcgcttaaggatgctttg
gatgataagggatggagctatgaggttgatgaaggaggtggtgccttttatggaccgaag
attgatcttaagatcgaagatgcattgggaagaaaatggcagtgctcaaccatacaggtt
gactttaatcttcctcagaggtttgacattacttatgtggacacaaactcggataagaaa
cgccctataatgatccacagggcggttttgggttccttagaaagattttttggggttctc
attgaacattacgctggggattttccattatggctctctcctgttcaagttcgggttctg
cccgtcacagacaatcagttggagttctgcaaggaagtgagtaagaagctgaaagcttgt
ggagtgagggctgagctgtgccatggagagaggttgccaaagctcataaggaacgcagag
acacagaaaatcccgttaatggcggttgtgggccctaaggaagtcgagaccggaactgtc
accgttaggtcgaggtttggaggagagctcggaaccattcctgttgatgacttcatcaac
aaaatcaacattgcagtggaaacaagaactgctttgtaa
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