Brassica oleracea (wild cabbage): 106335433
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Entry
106335433 CDS
T04124
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106335433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106335433
03110 Chaperones and folding catalysts [BR:
boe03110
]
106335433
03029 Mitochondrial biogenesis [BR:
boe03029
]
106335433
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106335433
Enzymes [BR:
boe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
106335433
Messenger RNA biogenesis [BR:
boe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
106335433
Chaperones and folding catalysts [BR:
boe03110
]
Heat shock proteins
HSP60 / Chaperonin
106335433
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
106335433
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106335433
Exosomal proteins of other body fluids (saliva and urine)
106335433
Exosomal proteins of breast cancer cells
106335433
Exosomal proteins of colorectal cancer cells
106335433
Exosomal proteins of bladder cancer cells
106335433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
106335433
NCBI-ProteinID:
XP_013629407
UniProt:
A0A0D3BN92
LinkDB
All DBs
Position
C3:complement(64621548..64625146)
Genome browser
AA seq
600 aa
AA seq
DB search
MASTFTATSSIGSMVAPNAHKTDKKLMNKLSSSSFGRRQNVFPKLRRSSPAVVCAAKELH
FNKDGTTIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP
VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAK
ALVAELKKMSKEVEDSELADVAAVSAGNNAEIGSMIAEAMSRVGRKGVVTLEEGKSAENA
LYVVEGMQFDRGYVSPYFVTDSEKMSVEFDNCKLLLVDKKITNARDLVGVLEDAIRGGYP
ILIIAEDIEQEALATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVG
LSLDKAGKEVLGHAAKVVLTKETSTIVGDGSTQDAVQKRVTQIKNLIEQAEQDYEKEKLN
ERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKV
DAIKAALDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKFGYNAATG
KYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPLPVGNPMDNSGYGY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaccttcactgcaacgtcttccattggctccatggttgctccaaatgcccac
aaaacggataagaagcttatgaacaagttgtcttcaagctctttcgggaggaggcagaac
gtgttccccaagctcagaagatccagtcctgcagttgtatgtgcagccaaggagttacat
ttcaacaaagacgggactaccatcaggaagcttcaagctggtgtcaacaagcttgcagac
cttgttggtgtgacacttggacctaaagggcgaaacgttgttcttgagagcaagtatgga
tcaccaagaattgttaatgatggtgtgactgttgctagggaggttgaattggaagaccct
gttgagaacattggtgccaaacttgttaggcaagcagctgccaagaccaatgatctggcc
ggtgatggtaccacaacatctgtggttcttgcacaaggttttattgctgagggtgtcaag
gtggtggctgctggtgcaaaccctgtattgatcactagaggcattgagaagacagcaaag
gctttggtagccgagctcaagaaaatgtctaaggaggttgaagacagtgagcttgcagat
gtggcagccgttagtgccggtaacaatgcagaaattggaagcatgattgctgaagcaatg
agcagagtgggcaggaagggtgtggtgacacttgaggaaggcaaaagtgcagagaacgct
ctctacgtggtagaaggaatgcaatttgatcgaggttatgtctctccttactttgtgaca
gacagcgagaaaatgtcagttgagtttgacaattgcaagttgcttcttgttgacaagaaa
attaccaatgcaagggatcttgttggtgttctggaggatgcaattagaggaggataccca
attttaataattgcggaagacattgagcaggaggctttagcgacccttgttgttaacaag
cttagaggcacactgaagattgcagctctcaaagctccaggatttggagagcgcaagagc
caataccttgatgatattgccatcctcactggagcgactgtgattcgtgaggaagttggt
ctttcacttgacaaagctggaaaagaggttcttggacatgcagcaaaggttgtcctcact
aaggagacttcgaccattgtgggtgatgggagcacacaggacgcagtgcaaaagcgtgtt
acacaaattaagaaccttattgagcaagcagagcaagactatgagaaggaaaaactgaat
gagagaattgcaaagctctctggtggagttgctgtgattcaggtcggagcacaaactgag
acagaactcaaagagaagaaactgagagttgaagatgctcttaatgctacaaaggctgct
gttgaggaaggaattgtggttggtggtggttgtactctgcttcgtcttgcttccaaggtg
gatgccattaaagccgcccttgacaatgatgaagaaaaggttggagcggatatcgtgaaa
agagcactgagttaccctctgaaactgattgccaagaatgcaggagtcaatggaagcgtt
gttagcgagaaggtgctttctaacgataacgtgaagttcggttacaatgctgcaaccggc
aagtacgaggatctaatggctgcaggaatcatcgatccaactaaggttgtgagatgttgc
ttggaacatgcagcttcggttgcaaagacattcttgatgtctgactgtgtcgttgttgag
atcaaggagcctgagccacttcccgtaggcaacccaatggacaactcaggttatggatac
tga
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