Brassica oleracea (wild cabbage): 106335440
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Entry
106335440 CDS
T04124
Name
(RefSeq) U-box domain-containing protein 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106335440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106335440
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106335440
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
U-box type E3
106335440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
Neurochondrin
zf-Nse
KAP
zf-RING_UBOX
Arm_2
MCAfunc
zf-C3HC4_4
MLKL_N
RPW8
zf-C3HC4_2
zf-C3HC4
HEAT_EF3_GNC1
zf-NOSIP
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
106335440
NCBI-ProteinID:
XP_013629415
UniProt:
A0A0D3BHI4
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All DBs
Position
C3:complement(48091297..48093955)
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AA seq
656 aa
AA seq
DB search
MEEEKGAVAQSLIDVVTEIASVSDYRITVKKLCSNLARRLKLLVPMFEEIRESNDPISED
TLGTLVSLKEALSSAKDHLKFCSGGSKIYLVMEREQVTSKLLEVSVQLEQSLSKIPYEDL
DISDEVKEQVELVLSQFRRAKGRVDASDDELYQDLHSLCIKSSDVDDHQPALQRVANKLQ
LMEIPDLAQESVALHEMVALSGGENNEEMAMVLKLIKDFVQMETDNSEDQKVGVSNGQTS
TAACQKIPPVIPDDFRCPISLEMMRDPVIVSTGQTYERTCIEKWIEAGHSTCPKTQQALT
STTLTPNYVLRSLIAQWCEANDIEPPKPPSSFRPRKVSSFSSPAEANKIEDLMWRLAYGN
PEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLATPDSRIQEHSVTALLNLSICE
NNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLL
NEGTHRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILA
SHPEGKSIIGSLDAVPSLVEFIRTGSPRNRENAAAVLVHLSSTDPQHLVEAQKLGLMGPL
IDLAGNGTDRGKRKAAQLLERISRLAEQQKETAAHVQTKEEAEPTDSASTTEAADT
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagaaaggtgccgttgcgcagagcttaatcgatgtagtgaccgagattgcg
tctgtttccgattaccgtataacggtgaagaagctatgcagcaatctagcgaggaggttg
aagctgcttgtcccgatgttcgaggagattagagaaagcaacgatcccatcagtgaagat
acgttggggacgctggtctccttgaaagaagccttgagctcagccaaggatcatctcaaa
ttctgcagcggagggagcaagatctatctggtcatggagagagaacaagtgacgagtaag
ctgctggaggtttccgttcagctagaacaatctttaagtaagattccttatgaggatctt
gacatatctgatgaagttaaagaacaggttgagctggttctcagtcagtttcggcgagcc
aaaggaagagtagatgcatcagacgatgagctatatcaagatcttcactcattgtgtatc
aaaagcagtgatgtggatgatcaccagcctgccctgcagcgggttgcaaacaagctacag
ctgatggagattcctgacctagctcaagaatcagttgctctgcacgaaatggttgcgttg
agcggtggtgaaaacaatgaagagatggcaatggtgctgaagctgattaaggattttgtg
cagatggagactgacaacagcgaggaccagaaagtaggggttagcaatggacaaacttcc
acggctgcgtgtcagaagataccccccgtgattcccgatgattttcgctgcccaatatct
ctggaaatgatgagagatccagttattgtttcaacagggcagacctacgaacgcacctgc
attgagaagtggatagaagctgggcactcgacatgtcctaaaacacagcaggcgctaaca
agcacaacgctcacacctaactatgttctccgtagtctcatagctcagtggtgcgaggct
aatgacattgagcctccaaaacctcctagcagttttaggcccaggaaagtatcgtccttc
tcgtccccggcagaggcaaacaagatcgaagatcttatgtggagactcgcttacggaaac
ccagaggaccaaagatctgcagctggcgagatccgcctccttgcaaaacgaaatgcagac
aaccgtgtggccatagccgaagctggagccatacctcttctcgtcggcctcctcgcaact
cctgattctcgtatccaagaacattctgtcacagctcttctgaacctctccatatgtgag
aacaacaaaggagccattgtttctgctggagctatccctggtatagttcaagttctcaag
aaaggaagcatggaggctagagagaatgcggctgctacgctttttagtctctcggtgatt
gacgaaaacaaagtcactatcggtgccttgggagcaatcccaccgctcgttgtgctgctt
aacgaaggcacacatagaggcaagaaagacgctgctactgcacttttcaacctctgcatt
taccaaggaaacaaaggaaaggccatacgagcaggagtgattcccaccttgactagactc
ttaacagagcccggaagcggaatggtcgatgaggcgctggcgattctggccattctcgct
agccatcccgaagggaaatcgatcataggatcactggacgcagtcccgagcctggtggag
tttatcagaacgggttcccctagaaacagagagaacgcagctgcggttctagttcatctc
agctctactgatccacaacatctggtggaagctcagaaactcggccttatgggtccattg
atagatttagccggaaacgggacagatagagggaaaagaaaagcagcccagttgcttgaa
cgtataagccgtctagctgaacagcagaaggagacagctgctcatgtacaaaccaaagaa
gaagctgaaccaacagattcagcatccaccacagaagctgctgacacttga
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