Brassica oleracea (wild cabbage): 106335510
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Entry
106335510 CDS
T04124
Name
(RefSeq) sister chromatid cohesion 1 protein 4-like
KO
K06670
cohesin complex subunit SCC1
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
boe03036
]
106335510
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
106335510
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
106335510
NCBI-ProteinID:
XP_013629504
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All DBs
Position
C3:3908278..3913884
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AA seq
982 aa
AA seq
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MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLL
LGVVRIYSKKVNYLFDDCSEALLKVKQAFRSAAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNEIFQGNYVDHHVSTREQITLQDSMDGVVYSTSQFGLDERFGDGDTSQAALELEEEV
FQGKDLIGSDDEGVQGTDHNAYMDAATPGIKDDMVGASEATSRDFNQEQVEDLAMRNEFI
EDAQAPQTPGLVEVPNSSSIRENLVSDDHMEVEELNAEEGRKASDELDANETHKRDEDLP
SESEAVPMEVDKSLIDENANAQNEPEKERAEHVHVSTSPCCSHITTEVEDPGQAITEAET
DDNSVVADKSDAVPSVESPGEPTVNNAEHCLSQEPKDPGEENQDHFAIATEINQKTDSSI
QGDGQAYSKPDEQLNEQLVTGCADSDLPAPEKVLAAPETEREGDENGFMVESTPDKEDPG
TCNEDAGNNNKITGKKRTFTESTITAESLNSVESVGLIQSKRTADSVPDDDDLLSSILVG
KSSFLKMRSTPVLEIATTKRSRAAPRSTATKRKVLMDDPMVLHGDVIREQLTNTEGIRRV
RKKAPCTVAEIVMLQRQALEDGLLKEPIFTGMSVELVSLHNEPFDLRGITIIKNDNELGE
TICALEVSKEGDGAADEVSLVVDDEIGQMPSEDKCDHVEDLQVEGYHESHDGGIGGEDHC
ADVHEKSCSGVIEITEGDVDHNAAILNETCLKGEEELPREDKKTDESAEVSEIGIDDQTP
CDNTIGSIENGHVEAGDLGLESLNEPLVEENNDVVNPEIEPDNNYEPHNEMFNEEAYMQS
APGAEALFGDGFIRDNYEMDTMEVAHDTGFLNVDDDEVDEDHEEDEGMEEGDETRLLENS
GWSSRTRAVAKYLQRIFDKEAENGKSVVVADKLLAGKTRKEASRMFFETLVLKTRDYIQV
EQANPYESITIKPRPKLTKSIF
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcgcagtttatattagcaaagaaaggaccacttgggacaatatggattgct
gcccatttggagaggaagcttcgtaagaatcaggtcgctgatactgacatcggtgtctcc
gttgattccattctatttccggaagctccaattgcattgcgactgtctagtcatcttctc
cttggtgtggttcgtatatactcaaaaaaggtgaactacctctttgatgattgcagcgag
gcgttgcttaaggtaaagcaagctttccgctctgctgcggttgacctgcccccggaagaa
tccactgcaccgtatcactcgatcacgttgcctgagacgtttgatcttgatgattttgag
cttcctgacaatgagatcttccagggtaactacgttgatcatcatgttagtacaagagag
cagatcacccttcaggattccatggatggtgttgtatactcaacatcgcaatttggatta
gatgagagatttggtgatggcgacacttctcaagctgctttggagcttgaagaggaagta
ttccagggtaaagatctaattggatcagatgatgagggagttcaaggcactgatcacaat
gcgtatatggatgccgcaacaccggggataaaggatgatatggtaggagcttctgaagca
acttccagagatttcaaccaagagcaggttgaagatcttgctatgaggaatgagttcatc
gaagacgctcaagctcctcaaacccctggattagttgaggtgccaaactcgtctagtatc
agagagaacctggtatctgatgatcacatggaggtagaggagttgaatgcagaagaaggt
aggaaggcctctgatgagctggatgctaatgagacgcataaacgtgatgaagacctgcct
tctgaatcagaggctgttcccatggaggtggataagtcgctgatagatgaaaatgccaac
gcccaaaacgagcctgagaaggagagagcagagcatgtacatgttagtacatcgccttgt
tgttctcacatcaccaccgaggtagaggatcctggtcaagcaatcaccgaggcagaaacc
gatgataatagtgttgtagcagataagtccgatgctgttccctcagtcgagtcccctgga
gagcctacagtgaataacgctgagcattgcctatcccaggaaccaaaagatcctggagaa
gagaaccaagatcattttgccattgccactgagatcaatcagaaaacagattctagtata
caaggagatgggcaagcgtacagtaaaccagatgagcaactgaatgaacagttggtaact
ggatgtgctgattctgatttgcctgcacctgaaaaggtattagctgcacctgagactgag
agagagggggatgaaaatggtttcatggttgaatccacaccagataaagaagatcctggc
acatgcaacgaggatgcaggaaataataataaaattactgggaaaaaacgcacttttact
gagagcaccataacagcagaaagcctgaactctgttgagtcagtggggctgattcagtcg
aagagaactgcagattctgttcctgatgacgatgacttgttgtcttccatcttagtggga
aagtcatcttttctgaagatgaggtctacccctgtacttgaaatagcaactacaaaacgg
tcacgagctgctcctcgttctactgccacaaagaggaaggttctaatggatgaccccatg
gtcttgcatggagacgttatacgagaacagctgacgaacactgaaggcatacgccgtgtg
cgaaagaaggcaccttgcactgttgctgaaatcgttatgcttcaaaggcaggctttggag
gatggactcttgaaggagccaatattcactggtatgtcggtggaactagtctctctacac
aatgagccctttgatctaagaggaatcacgataatcaagaatgataacgagcttggtgaa
acaatatgtgcgttggaagtttcaaaagaaggcgatggagctgctgatgaagtaagtctt
gtagtggatgacgagatcggtcaaatgccatctgaggacaagtgcgatcatgtagaggat
ttacaggtggaaggataccatgaaagccatgatggagggataggcggtgaagatcattgt
gctgatgttcatgaaaaaagttgcagtggtgttattgaaattactgaaggcgatgttgat
cacaacgccgccattctcaatgagacatgtttaaaaggtgaagaggagcttccacgtgaa
gataagaaaacagatgaatcagctgaagtcagcgagattgggatagacgatcagactcca
tgtgataacacaattggctctattgaaaatggacacgtagaagctggtgatttgggtttg
gaaagtctcaacgaacctcttgtggaagaaaataatgatgtggtgaatccagagattgag
cctgataacaactacgaaccgcataatgagatgtttaatgaggaggcttatatgcaaagt
gcaccaggtgcagaagctctttttggcgatggttttataagagataactacgaaatggat
accatggaagtggcacatgacacaggatttttgaacgtggatgatgatgaagtcgatgaa
gatcatgaagaagacgaaggtatggaagaaggtgatgaaactcgtcttctagagaacagt
ggatggtcttctcgtaccagggctgtggcgaagtatctccagagaatatttgataaagaa
gctgagaatgggaagagtgttgttgtagcagacaaacttttagctgggaaaacccgtaaa
gaagcatcgagaatgttttttgaaaccctggttttgaaaacaagagattatatccaagtt
gaacaagctaacccctatgaaagcatcaccatcaaaccgcgaccaaaactcaccaaatcc
atcttctag
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