Brassica oleracea (wild cabbage): 106335576
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Entry
106335576 CDS
T04124
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106335576
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106335576
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Laminin_I
PspA_IM30
Golgin_A5
CREPT
Motif
Other DBs
NCBI-GeneID:
106335576
NCBI-ProteinID:
XP_013629585
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Position
C3:complement(2097020..2099400)
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AA seq
461 aa
AA seq
DB search
MSTVFSEEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPL
LYLANDILQNSKRQGNEFVQEFWNVLPKAVKDIVSQGDDRGKGVVSRLVQIWEDRRVFGS
RSKNLRDVMLGEDCPLPLDVSKKRPRGSKSSKRDRDSKSSRTKVSSGGGVAEKIVSAYHL
VVAENSNEEAEMSKCKSAVKRIRKMEKDVEEACSTAKDNPKRESLAKELEEEEYLLRQCI
EKLKSVQGSRTSLVNQLKDALREQESELENLEAQIQVAQEQTEEAQNMQKRLKDEDYAPK
PTTVAPGSVSTDNNGQSSKMTPASIAAMLTASTSSHMIMQSVLSSFAAEATKTSGLSKSE
STVPVSHNNSQNQTPATQGQGQYHVIPNPAPPQPQPQFMNPPVMNNPYGFGNIPLMPPGL
PPPPPPPHMIGNQQPQSNSAQQQQGTFQPSGIMYYGAPHHS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgtattcagcgaagagatcctcatcgataagctcgccaagctcaacagcact
caacagtccatcgaaactctgtcgcattggtgtatattcaaccgggtgaaagctgagctg
atagtgacgacatgggagaaacagtttcacagcacggagatggctcagaaagtgcctctt
ttgtatttggctaatgatattcttcagaacagtaagcgtcaggggaatgagttcgtgcag
gagttttggaatgttcttcctaaggctgttaaagacattgtctctcagggtgatgatcgt
ggcaaaggcgtcgtctcacgcttggtccagatatgggaagatagaagagtgtttggatca
cgttcgaagaatcttagagatgtgatgcttggagaagactgccctctgccacttgatgtc
agcaaaaagaggcctcgtggatctaaatcctcaaagagggacagggattcaaaatcctcc
agaacgaaagtatcaagtggaggaggtgtggctgagaagatagtatcagcgtatcatttg
gttgttgcggaaaactcaaatgaagaagctgagatgagtaaatgcaagtctgcagtcaaa
cgaatcaggaagatggagaaagatgttgaggaagcctgctctactgcaaaagacaacccg
aagagagaatcactggccaaagagttggaagaggaagaataccttttgagacaatgcatt
gagaagcttaaatctgttcaagggagtaggacttcccttgtcaaccagcttaaagacgca
ctacgcgaacaggaatctgaactggagaatcttgaagctcagattcaggtggcacaagaa
caaacagaagaagctcaaaacatgcagaaacgcctcaaggacgaggattatgcaccgaaa
ccaacaaccgtcgctccaggatcagtctcaactgacaacaacggccaatcatcaaaaatg
acgccggcttctatagctgcgatgctcacagcttccacctcgtcacatatgatcatgcaa
tctgttctctcttcattcgcagctgaagcaacaaagacctccggtctatccaaatctgag
agcacagttccggtttctcacaacaactcccagaaccagacacccgccacacaaggtcaa
ggtcagtaccatgtgatccctaatccagcaccgccacaaccacaaccacagttcatgaat
ccaccggtaatgaacaatccttacggctttggtaacattccgttaatgccacctggactt
ccgccgcctccaccgccaccacatatgataggtaatcaacagcctcaatccaactcagct
caacaacaacaaggtactttccagccatctggaataatgtattatggagctccacaccac
tcttaa
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