KEGG   Brassica oleracea (wild cabbage): 106335712
Entry
106335712         CDS       T04124                                 
Name
(RefSeq) serine hydroxymethyltransferase 1, mitochondrial isoform X1
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe00260  Glycine, serine and threonine metabolism
boe00460  Cyanoamino acid metabolism
boe00630  Glyoxylate and dicarboxylate metabolism
boe00670  One carbon pool by folate
boe01100  Metabolic pathways
boe01110  Biosynthesis of secondary metabolites
boe01200  Carbon metabolism
boe01230  Biosynthesis of amino acids
boe01240  Biosynthesis of cofactors
boe04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:boe00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    106335712
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    106335712
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    106335712
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    106335712
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    106335712
Enzymes [BR:boe01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     106335712
SSDB
Motif
Pfam: SHMT
Other DBs
NCBI-GeneID: 106335712
NCBI-ProteinID: XP_013629759
LinkDB
Position
C3:54388370..54391519
AA seq 523 aa
MAMAMALRRLSSSVDKPIRPLIRSTTCYMSSLPSEAVDDKERSRVTCNGLLQWPKQLNAS
LEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG
NEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPH
GGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVAGASAY
ARLYDYARIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGA
MIFYRKGVKEINKQGKEVLYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKA
YQEQVLSNSAKFAQTLMEKGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNK
NTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTLALKVKSEAQGTKLKD
FVSAMEASSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggcgatggccatggctcttcggagactttcttcttcagttgacaaacctattcgtcct
cttatcagatcaactacatgctacatgtcatctctgcccagtgaagctgttgatgacaag
gagagatctcgtgtcacttgtaatggcttgttacagtggccaaaacagcttaacgcatct
ttggaggaggttgatcctgagattgctgacattattgagcatgagaaagctagacaatgg
aagggacttgaactcattccatctgagaatttcacatctgtctcggtgatgcaagctgtt
ggctctgtgatgactaacaagtacagtgaagggtaccctggtgctagatactatggagga
aatgagtacatagacatggcagagactttatgccaaaagcgcgctcttgaggctttcaga
ttagatcctgaaaagtggggagtgaatgtgcaacccttgtctggatctcctgcgaacttc
catgtctacactgcattgctcaaacctcatgagagaatcatggcacttgatcttcctcat
ggtggtcatctttctcatggttatcagactgacaccaagaagatatctgctgtgtctatc
ttctttgagacaatgccttatcgcttggacgagagcactggctacattgactatgatcag
atggagaaaagtgctactcttttcaggccaaaactgattgttgctggtgcgagtgcttat
gctcgattgtatgactatgcccgcatccgaaaggtgtgtaacaagcaaaaagctgtgatg
ctagcagatatggcacacatcagtggtttggttgctgctggtgtaatcccttcaccgttc
gactatgcggatgttgtgaccaccacaactcacaagtcacttcgtggaccccgtggagcc
atgattttctacagaaagggtgttaaagaaattaacaaacaagggaaagaggttttgtat
gattttgaagacaagataaatcaagccgtcttccctggtcttcaaggcggtccacataac
cacactattacaggactagctgttgctttaaaacaggcaactacttcagagtacaaagca
taccaagagcaagtcctgagcaactctgcaaagttcgctcagactctgatggagaaaggt
tatgaacttgtttctggtggaaccgacaaccatctggttctagtgaacctgaagcccaag
ggaattgatggatctagagttgagaaagtgttggaagctgttcacattgcatcaaacaaa
aacactgttcctggagatgtttctgccatggttcctggtggaatcagaatgggtacacct
gctctcacttccagaggctttgttgaggaagactttgctaaagtagctgaatactttgac
aaagctgtaacgttggctctcaaagtcaaatctgaagctcaagggaccaagctgaaagac
tttgtgtcagcaatggaagcttcttcaaccattcaatcagagattgctaagctgcgccat
gaagttgaggaatttgctaaacagtttccaacaattgggtttgagaaagaaaccatgaag
tacaagaactaa

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